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. 2024 Sep 26;90(10):e00348-24. doi: 10.1128/aem.00348-24

TABLE 1.

Defined set of useful reagents described in this study

Reagent Typea Key features
pEVS104 Plasmid Conjugal helper plasmid that increases conjugation efficiency, does not replicate in recipient cells (37)
pTNS++ (pJMP8045) Plasmid pBBR1 origin replicating vector expressing Tn7 transposase genes, increases Tn7 transconjugant recovery in R. sphaeroides
pJMP8602 Plasmid Tn7 plasmid containing a promoterless mScarlet-I gene for testing promoter activity
PC Promoter Synthetic, IPTG-inducible promoter in R. sphaeroides and N. aromaticivorans
PD Promoter Synthetic, IPTG-inducible promoter in R. sphaeroides and N. aromaticivorans
PG Promoter Synthetic, IPTG-ducible promoter in R. sphaeroides and N. aromaticivorans
PO Promoter Synthetic, IPTG-inducible promoter in R. sphaeroides and N. aromaticivorans
PP Promoter Synthetic, IPTG-inducible promoter in R. sphaeroides and N. aromaticivorans
pJMP8921 Plasmid Mobile-CRISPRi plasmid containing mScarlet-I reporter, PD-sgRNA (BsaI/no spacer), and PC-dCas9 for testing system (no guide control)
pJMP8823 Plasmid Mobile-CRISPRi plasmid containing mScarlet-I reporter, PD-mScar1 sgRNA, and PC-dCas9 for testing system (mScarlet-I targeting guide)
pJMP8930 Plasmid Mobile-CRISPRi plasmid containing PD-sgRNA (BsaI/no spacer) and PC-dCas9 for cloning new sgRNA spacers
pJMP8923 Plasmid Mobile-CRISPRi plasmid containing mScarlet-I reporter, PD-sgRNA (BsaI/no spacer), and PG-dCas9 for testing system (no guide control)
pJMP8835 Plasmid Mobile-CRISPRi plasmid containing mScarlet-I reporter, PD-mScar1 sgRNA, and PG-dCas9 for testing system (mScarlet-I targeting guide)
pJMP8932 Plasmid Mobile-CRISPRi plasmid containing PD-sgRNA (BsaI/no spacer) and PG-dCas9 for cloning new sgRNA spacers
a

See Fig. 2B and Table S15 for promoter sequences.