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. 2024 Oct 18;14(20):3014. doi: 10.3390/ani14203014

Table 3.

Prediction accuracies of different models for all three growth traits.

Model * BW WW YW
GBLUP 0.447 ± 0.023 0.373 ± 0.019 0.321 ± 0.022
Bayes A 0.426 ± 0.018 0.375 ± 0.012 0.303 ± 0.013
Bayes B 0.21 ± 0.010 0.26 ± 0.022 0.22 ± 0.015
RF_default 0.350 ± 0.025 0.405 ± 0.003 0.261 ± 0.001
SVM_default 0.334 ± 0.014 0.360 ± 0.021 0.280 ± 0.027
RF_optimized 0.421 ± 0.039 0.451 ± 0.011 0.306 ± 0.028
SVM_optimized 0.406 ± 0.034 0.380 ± 0.018 0.311 ± 0.004
MLP 0.408 ± 0.021 0.402 ± 0.027 0.304 ± 0.014
CNN 0.433 ± 0.034 0.419 ± 0.024 0.303 ± 0.011

* Prediction accuracy of the model is calculated as Pearson’s correlation between corrected phenotypes and direct genomic values in the validation dataset.