Table 3.
Model * | BW | WW | YW |
---|---|---|---|
GBLUP | 0.447 ± 0.023 | 0.373 ± 0.019 | 0.321 ± 0.022 |
Bayes A | 0.426 ± 0.018 | 0.375 ± 0.012 | 0.303 ± 0.013 |
Bayes B | 0.21 ± 0.010 | 0.26 ± 0.022 | 0.22 ± 0.015 |
RF_default | 0.350 ± 0.025 | 0.405 ± 0.003 | 0.261 ± 0.001 |
SVM_default | 0.334 ± 0.014 | 0.360 ± 0.021 | 0.280 ± 0.027 |
RF_optimized | 0.421 ± 0.039 | 0.451 ± 0.011 | 0.306 ± 0.028 |
SVM_optimized | 0.406 ± 0.034 | 0.380 ± 0.018 | 0.311 ± 0.004 |
MLP | 0.408 ± 0.021 | 0.402 ± 0.027 | 0.304 ± 0.014 |
CNN | 0.433 ± 0.034 | 0.419 ± 0.024 | 0.303 ± 0.011 |
* Prediction accuracy of the model is calculated as Pearson’s correlation between corrected phenotypes and direct genomic values in the validation dataset.