Skip to main content
[Preprint]. 2024 Oct 15:2024.10.12.618009. [Version 1] doi: 10.1101/2024.10.12.618009

Table 2:

High coverage tracks from seven functional datasets on the HPRC pangenome. For each sample, the table shows how many paths had a mean coverage of at least ten reads and how long they were.

Dataset Paths Average bases Average nodes Traversing >2 nodes
Breast epithelium 570,155 109.80 2.68 65,095 (11.4%)
Gastrocnemius medialis 342,830 94.47 2.43 53,595 (15.6%)
Gastroesophageal sphincter 555,618 115.69 2.73 72,407 (13%)
Peyer’s patch 270,094 97.88 2.62 43,591 (16.1%)
Sigmoid colon 678,380 115.10 2.69 82,906 (12.2%)
Spleen 531,910 104.97 2.66 67,153 (12.6%)
Thyroid gland 377,157 95.63 2.41 56,441 (15%)