Table 2:
High coverage tracks from seven functional datasets on the HPRC pangenome. For each sample, the table shows how many paths had a mean coverage of at least ten reads and how long they were.
| Dataset | Paths | Average bases | Average nodes | Traversing >2 nodes |
|---|---|---|---|---|
| Breast epithelium | 570,155 | 109.80 | 2.68 | 65,095 (11.4%) |
| Gastrocnemius medialis | 342,830 | 94.47 | 2.43 | 53,595 (15.6%) |
| Gastroesophageal sphincter | 555,618 | 115.69 | 2.73 | 72,407 (13%) |
| Peyer’s patch | 270,094 | 97.88 | 2.62 | 43,591 (16.1%) |
| Sigmoid colon | 678,380 | 115.10 | 2.69 | 82,906 (12.2%) |
| Spleen | 531,910 | 104.97 | 2.66 | 67,153 (12.6%) |
| Thyroid gland | 377,157 | 95.63 | 2.41 | 56,441 (15%) |