Antibodies |
|
Rabbit monoclonal anti-Merlin (D3S3W) |
Cell Signaling Technology |
Cat#12888S; RRID: AB_2650551
|
Rabbit monoclonal anti-LATS1(C66B5) |
Cell Signaling Technology |
Cat#3477S; RRID: AB_2133513
|
Rabbit monoclonal anti-LATS2(D83D6) |
Cell Signaling Technology |
Cat#5888S; RRID: AB_10835233
|
Rabbit monoclonal anti-SAV1(D6M6X) |
Cell Signaling Technology |
Cat#13301S; RRID: AB_2798176
|
Mouse monoclonal anti-WWC1 |
Zhang et al.74
|
N/A |
Rabbit polyclonal anti-WWC2 |
Abcam |
Cat#ab126356; RRID: AB_11140331
|
Rabbit polyclonal anti-WWC3 |
Qi et al.30
|
N/A |
Rabbit monoclonal anti-YAP(D8H1X) |
Cell Signaling Technology |
Cat#14074S; RRID: AB_2650491
|
Rabbit monoclonal anti-Vinculin(E1E9V) |
Cell Signaling Technology |
Cat#13901S; RRID: AB_2728768
|
Rabbit monoclonal anti-Phospho-YAP(Ser127) |
Cell Signaling Technology |
Cat#13008; RRID: AB_2650553
|
Rabbit monoclonal anti-Non-phospho(Active) YAP(Ser127)(E6U8Z) |
Cell Signaling Technology |
Cat#29495; RRID: AB_2798974
|
Rabbit polyclonal anti-CYR61(H-78) |
Santa Cruz Biotechnology |
Cat#sc-13100; RRID: AB_2088733
|
Rabbit polyclonal anti-Ki67 |
Abcam |
Cat#ab15580; RRID: AB_443209
|
Mouse monoclonal anti-YAP1(63.7) |
Santa Cruz Biotechnology |
Cat#sc-101199; RRID: AB_1131430
|
Rabbit monoclonal anti-WT1 |
Cell Signaling Technology |
Cat#83535; RRID: AB_2800020
|
Rabbit polyclonal anti-Mesothelin |
Thermo Fisher Scientific |
Cat#PA5-79698; RRID: AB_2746813
|
Rabbit monoclonal anti-Flag tag (D6W5B) |
Cell Signaling Technology |
Cat#14793S; RRID: AB_2572291
|
Mouse monoclonal anti-FLAG M2(HRP conjugated) |
Sigma-Aldrich |
Cat#A8592; RRID: AB_439702
|
Rabbit monoclonal anti-Phospho-LATS1(Thr1079)(D57D3) |
Cell Signaling Technology |
Cat#8654S; RRID: AB_10971635
|
Mouse monoclonal anti-Myc Tag |
MBL International |
Cat#M192-3; RRID: AB_11160947
|
Mouse monoclonal anti-GAPDH(HRP conjugated) |
Abways Technology |
Cat#AB2000 |
Goat polyclonal anti-CTGF(L-20) |
Santa Cruz Biotechnology |
Cat#sc-14939; RRID: AB_638805
|
Goat anti-rabbit IgG antibody, Alexa Fluor 488 |
Thermo Fisher Scientific |
Cat#A11001; RRID: AB_2534069
|
|
Bacterial and virus strains |
|
Trans5α Chemically Competent Cell |
TransGen Biotech |
Cat#CD201-01 |
pLVX lentivirus |
This paper |
N/A |
LentiCRISPR v2 |
Sanjana et al.75
|
Addgene 52961 |
Adeno-Cre |
HANBIO |
Cat#HBAD-1010 |
Adeno-associated virus (AAV) |
This paper |
N/A |
|
Chemicals, peptides, and recombinant proteins |
|
DAPI |
Sigma-Aldrich |
Cat#D9542 |
Fetal bovine serum |
Invitrogen |
Cat#10091-148 |
Protease inhibitor cocktail |
MCE |
Cat#HY-K0010 |
Phosphatase inhibitor Cocktail I |
MCE |
Cat#HY-K0021 |
Phosphatase inhibitor Cocktail II |
MCE |
Cat#HY-K0022 |
Phosphatase inhibitor Cocktail II |
MCE |
Cat#HY-K0022 |
PEI |
Polysciences |
Cat#23966-2 |
PolyJet |
Signagen Laboratories |
Cat#SL100688 |
Envision anti-Rabbit |
DAKO |
Cat#K4002 |
DAB reagent |
GeneTech |
GK500705 |
Prime STAR Max DNA polymerase |
Takara |
Cat#R045A |
VT103 |
Selleck |
Cat#E1598 |
VT107 |
Selleck |
Cat#E1599 |
|
Critical commercial assays |
|
TaKaRa MiniBEST Universal RNA Extraction Kit |
Takara |
Cat#9767 |
TB Green® Premix Ex Taq™ (Tli RNaseH Plus) |
Takara |
Cat#RR420A |
TransScript® First-Strand cDNA Synthesis SuperMix |
TransGen Biotech |
Cat#AT301-03 |
ClonExpress MultiS One Step Cloning Kit |
Vazyme |
Cat#C113-02 |
High-sig ECL Western Blotting |
Tanon |
Car#180-501 |
Cell Counting Kit(CCK-8) |
YEASEN |
Cat#40203ES60 |
|
Deposited data |
|
TCGA Mesothelioma data |
Hmeljak et al.42
|
https://portal.gdc.cancer.gov/projects/TCGA-MESO, dbGap Study Accession:phs000178.v11.p8 |
|
Experimental models: Cell lines |
|
Human: HEK293A |
Yu et al.76
|
N/A |
Human: HEK293T |
National collection of Authenticated Cell Cultures |
Cat#SCSP-502 |
Human: NCI-H2452 |
Tang et al.51
|
N/A |
Human: NCI-H2373 |
Tang et al.51
|
N/A |
Human: NCI-H2052 |
Tang et al.51
|
N/A |
HEK293A NF2 KO |
Qi et al.30
|
N/A |
|
Experimental models: Organisms/strains |
|
Mouse: Nf2fl/fl (C57/BL6J background) |
Wang et al.77
|
N/A |
Mouse: Savfl/fl(C57/BL6J background) |
Ji et al.78
|
N/A |
Mouse: Wwc1fl/fl;Wwc2fl/fl (C57/BL6J background) |
Qi et al.31
|
N/A |
Mouse: Nf2fl/fl;Savfl/fl (C57/BL6J background) |
Qi et al.31
|
N/A |
Mouse: Nf2fl/fl;Wwc1fl/fl;Wwc2fl/fl (C57/BL6J background) |
Qi et al.31
|
N/A |
Mouse: Nf2fl/fl;Trp53fl/fl (C57/BL6J background) |
This paper |
N/A |
Mouse: Nf2fl/fl;Trp53fl/fl;Wwc1fl/fl;Wwc2fl/fl (C57/BL6J background) |
This paper |
N/A |
Mouse: SuperHippofl/fl (C57/BL6J background) |
Qi et al.30
|
N/A |
Mouse: Nf2fl/fl;Trp53fl/fl;SuperHippofl/+ (C57/BL6J background) |
This paper |
N/A |
|
Oligonucleotides |
|
WWC1 siRNA: 5′-GGUUGGAGAUUACUUCAUAGA-3′ |
This paper |
N/A |
WWC2 siRNA: 5′-GGAUCUUCAUCCAGUACUAAA-3′ |
This paper |
N/A |
WWC3 siRNA: 5′-GGAUAUUCAACAAAUACAAAG-3′ |
This paper |
N/A |
RT-qPCR primer GAPDH forward 5′-ATGGGGAAGGTGAAGGTCG-3′ |
This paper |
N/A |
RT-qPCR primer GAPDH reverse 5′- GGGGTCATTGATGGCAACAATA-3′ |
This paper |
N/A |
RT-qPCR primer CTCF forward 5′- CCAATGACAACGCCTCCTG-3′ |
Yu et al.76
|
N/A |
RT-qPCR primer CTCF reverse 5′- TGGTGCAGCCAGAAAGCTC-3′ |
Yu et al.76
|
N/A |
RT-qPCR primer CYR61 forward 5′- AGCCTCGCATCCTATACAACC-3′ |
Yu et al.76
|
N/A |
RT-qPCR primer CYR61 reverse 5′- TTCTTTCACAAGGCGGCACTC-3′ |
Yu et al.76
|
N/A |
RT-qPCR primer ANKRD1 forward 5′- CACTTCTAGCCCACCCTGTGA-3′ |
Yu et al.76
|
N/A |
RT-qPCR primer ANKRD1 reverse 5′- CCACAGGTTCCGTAATGATTT-3′ |
Yu et al.76
|
N/A |
|
Recombinant DNA |
|
pLVX-puro vector |
Takara |
#632164 |
PsPAX2 |
Didier Trono |
Addgene #12260 |
pMD.2g |
Didier Trono |
Addgene #12259 |
AAV2/6-CMV-3xFLAG-SuperHippo-P2A-NF2-WPRE |
This paper |
N/A |
AAV2/6-CMV-3xFLAG-NF2-WPRE |
This paper |
N/A |
AAV2/6-CMV-3xFLAG-SuperHippo-WPRE |
This paper |
N/A |
|
Software and algorithms |
|
GraphPad Prism 8 |
GraphPad |
https://www.graphpad.com/scientific-software/prism/ |
ImageJ |
NIH |
https://imagej.nih.gov/ij/ |
R (version 3.6.2) |
Open Source |
https://www.r-project.org/ |