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. 2001 Feb;75(4):2002–2009. doi: 10.1128/JVI.75.4.2002-2009.2001

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Copyright © 2001, American Society for Microbiology

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FIG. 2 — Complete nucleotide sequence of a TERV provirus including the host flanking sequence. The complete provirus is 3,711 bp in length. Direct repeats (5 bp) flanking the provirus are shaded, and major LTR regions are indicated. The repeat region (R), tRNA^Trp PBS, and PPT are underlined. The TATA box and polyadenylation signal are boxed. Translations of Gag and Env proteins are below the nucleotide sequence. Downward arrow, junction between the highly conserved gag sequence (5′) and regions of low conservation (3′). The shaded region in Gag corresponds to a region possibly homologous to the L domain (PPPPY) in ASLVs. Double underlining, putative packaging sequences (MΨ and direct repeat 1). Only one copy of RSV-related direct repeat 1 was found in TERV. Primer sequences described in the text are underlined, and the primer names are indicated. Probe^Matrix and Probe^env, fragments representing probes used for Southern hybridization.

FIG. 2 — Complete nucleotide sequence of a TERV provirus including the host flanking sequence. The complete provirus is 3,711 bp in length. Direct repeats (5 bp) flanking the provirus are shaded, and major LTR regions are indicated. The repeat region (R), tRNA^Trp PBS, and PPT are underlined. The TATA box and polyadenylation signal are boxed. Translations of Gag and Env proteins are below the nucleotide sequence. Downward arrow, junction between the highly conserved gag sequence (5′) and regions of low conservation (3′). The shaded region in Gag corresponds to a region possibly homologous to the L domain (PPPPY) in ASLVs. Double underlining, putative packaging sequences (MΨ and direct repeat 1). Only one copy of RSV-related direct repeat 1 was found in TERV. Primer sequences described in the text are underlined, and the primer names are indicated. Probe^Matrix and Probe^env, fragments representing probes used for Southern hybridization.