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. 2005 Jun;71(6):3085–3092. doi: 10.1128/AEM.71.6.3085-3092.2005

TABLE 1.

Plasmids used in this study

Plasmid Relevant characteristic(s) Source or reference
S. lividans
    pIJ702 Vector containing tsr and mel markers 11
    pIAF42 pIJ702 derivative containing xlnB1 from S. lividans 17
    pIAF906 pIJ702 derivative containing xlnA from S. lividans as a 2-kb SphI-SacI fragment where a HindIII and KpnI restriction site were added on each side of the signal sequence 21
    pIAF907 pIAF906 derivative in which the KpnI, PstI, SphI, and BglII sites were removed and the xlnA coding sequence was eliminated and replaced by a cloning cassette of HindIII, EcoRI, XbaI, and SacI 21
    pIAF911A.8 pIAF906 derivative in which the xlnA signal sequence was replaced by the celA signal sequence plus 57 nt upstream of it, containing a sequence complementary to the 16S rRNA and two translation initiation codons 15
    pIAF916C pIAF906 derivative containing the xlnC signal sequence and the xlnC coding sequence 9
    pIAF916C-40 pIAF916C derivative in which the xlnC signal sequence was deleted of 30 nt from its 5′ end 9
    pIAF907-SB1 pIAF911A.8 derivative in which the xlnA coding sequence was replaced by the xlnB1 coding sequence This work
    pIAF907-TB2 pIAF916C-40 derivative in which the xlnC coding sequence was replaced by the xlnB2 coding sequence and the 57 nt upstream of the celA signal sequence was added in front of the truncated xlnC signalsequence This work
    pIAF907-SB1 TB2 pIAF907-SB1 derivative in which a fragment containing the signal sequence and xlnB2 present in pIAF907-TB2 was inserted downstream of xlnB1 This work
    pIAF907-SB1 pATB2 pIAF907-SB1 derivative in which the fragment containing the xlnA promoter, the signal sequence, and xlnB2 present in pIAF907-TB2 was inserted downstream of xlnB1 This work
    pIAF907-SB1pASB1 pIAF907-SB1 derivative in which the fragment containing the xlnA promoter, the signal sequence, and xlnB1 present in pIAF907-SB1 was inserted downstream of xlnB1 This work
    pIAF907-TB2pATB2 pIAF907-TB2 derivative in which the fragment containing the xlnA promoter, the signal sequence, and xlnB2 present in pIAF907-TB2 was inserted downstream of xlnB2 This work
    pIAF915 pIAF906 derivative containing the xlnB1 signal sequence 21
    pIAF915B1 pIAF915 derivative in which the xlnA coding sequence was replaced by the xlnB1 coding sequence This work
    pIAF915B2 pIAF915 derivative in which the xlnA coding sequence was replaced by the xlnB2 coding sequence This work
    pIAF916 pIAF906 derivative containing the xlnC signal sequence 21
    pIAF916B1 pIAF916 derivative in which the xlnA coding sequence was replaced by the xlnB1 coding sequence This work
    pIAF916B2 pIAF916 derivative in which the xlnA coding sequence was replaced by the xlnB2 coding sequence This work
E. coli
    pTZ19 Phagemid carrying bla and part of lacZ Pharmacia
    pIAF807 pTZ19 derivative containing promotorless xlnA with a HindIII and KpnI restriction site on each side of the signal sequence 21
    pIAF811-A.8 pIAF807 derivative in which the xlnA signal sequence was replaced by the celA signal sequence plus 57 nt upstream of it, containing a sequence complementary to the 16S rRNA and two initiation codons 15
    pIAF815 pIAF807 derivative in which the xlnA signal sequence was replaced by the xlnB1 signal sequence 21
    pIAF815B1 pIAF815 derivative in which the xlnA coding sequence was replaced by the xlnB1 coding sequence This work
    pIAF815B2 pIAF815 derivative in which the xlnA coding sequence was replaced by the xlnB2 coding sequence This work
    pIAF816 pIAF807 derivative in which the xlnA signal sequence was replaced by the xlnC signal sequence 21
    pIAF816B1 pIAF816 derivative in which the xlnA coding sequence was replaced by the xlnB1 coding sequence This work
    pIAF816B2 pIAF816 derivative in which the xlnA coding sequence was replaced by the xlnB2 coding sequence This work