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. 2005 Jun;43(6):2668–2673. doi: 10.1128/JCM.43.6.2668-2673.2005

TABLE 3.

Strains used in this study and associated multiplex real-time PCR results

Phenotype of strains Genotype Total no. of subjects (n = 217j) No. of positive results with probe specific for:
O157h stx2i
E. coli O157:H7a stx2 30 30 30
E. coli O157:H7 stx1 4 4 0
E. coli O157:H7 Non-stx 1 1 0
Non-O157 clinical E. colib from Taiwan Othersf 158 0 0
Non-O157 clinical E. colic with stx2 gene from Taiwan O28 and stx2g 2 0 2
Salmonella Enteritidis strainsd 10 0 0
Shigella spp.e 10 0 0
Pseudomonase 1 0 0
Citrobacter freundii ATCC 8090e 1 0 0
a

All strains were isolated from the United States (10 strains), Canada (12 strains), Japan (9 strains), and Taiwan (4 strains).

b

All strains were isolated from clinical samples of diarrhea cases in Taiwan.

c

All strains were isolated from clinical samples in Taiwan by the Centers for Disease Control, Taiwan.

d

All strains were isolated from food-borne cases by the Centers for Disease Control, Taiwan.

e

All strains were from Bioresource Collection and Research Center, Hsinchu, Taiwan.

f

All genotypes are non-stx2; and their phenotypes include the following: O1, O3, O6:H?, O6:H12, O8:H?, O8; O14; O15:H21 O15:NM, O18, O20:H20, O23, O25:H51, O25:K98:NM, O26:H?, O26:H11, O27, O28:H?, O28ac:H?, O28ac, O29:H?, O29:NM, O30, O38, O44, O48, O55:H?, O55:H12, O75, O78:H11, O78:H2, O78:K80:H12, O86a, O90, O111ab:H21, O112ac:H?, O114, O115, O123, O124:H?, O125, O127a:H1, O127a:H16, O136:H19, O138, O142:H6, O144, O146:NM, O148, O153:NM, O158, O159:H21, O166, O168, O169:H28, and unknowns.

g

All genotypes are stx2, and the serotype was O28ac.

h

Numbers of positive results by the multiplex real-time PCR assay for the rfbE. coli O157:H7 gene.

i

Numbers of positive results by the multiplex real-time PCR assay for the stx2 gene.

j

Total numbers of strains in this study.