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. 2024 Oct 29;25:1013. doi: 10.1186/s12864-024-10926-7

Table 4.

Summary of the main characteristics of 16 putative modulators of mutable collagenous tissue (MCT): top BLAST hit, the status of the open reading frame, number of amino acids (Size), molecular weight in Daltons (Weigth), the isoelectric point (pI), the presence of a signal peptide, as predicted by SignalP, and localization of the protein product, as predicted by DeepLoc. Sequences are identified by their suffix name, and all of them have the prefix “TRINITY_.” The corresponding amino acid sequences are available on Zenodo under DOI 10.5281/zenodo.13830943

Sequence Top BLAST hit ORF status Size, aa Weight (Da) pI SignalP DeepLoc
DN1888_c0_g1 KAF6027037.1 hypothetical protein EB796_014653 (Bugula neritina) 3’ partial 872 87914.35 9.02 No SP Extracellular
DN9695_c0_g1 XP_038071724.1 uncharacterized protein LOC119740469 (Patiria miniata) 5’ partial 941 105049.37 5.12 SP Cell Membrane
DN894_c1_g2 XP_022109156.1 uncharacterized protein LOC110989228 (Acanthaster planci) Complete 574 62324.95 5.25 SP Extracellular
DN819_c1_g1 No hit Complete 45 5243.09 4.12 SP Extracellular
DN81063_c0_g1 XP_022104884.1 uncharacterized protein LOC110986900 (Acanthaster planci) Internal 525 58241.64 7.18 No SP Extracellular
DN1190_c0_g1 No hit Internal 366 36461.54 11.07 No SP Extracellular
DN722_c0_g2 No hit Complete 86 9508.15 8.4 SP Extracellular
DN3456_c0_g2 No hit 3’ partial 109 11956.31 3.74 SP Extracellular
DN4715_c0_g1 No hit Complete 176 18570.72 7.35 SP Cell membrane
DN130227_c0_g1 No hit 3’ partial 47 5507.32 3.91 SP Extracellular
DN2540_c0_g1 No hit Complete 451 45656.43 5.69 SP Extracellular
DN1888_c0_g2 No hit 3’ partial 104 9040.43 10.86 No SP Nucleus/ extracellular
DN4472_c0_g1 No hit 3’ partial 50 5673.68 4.38 SP Extracellular
DN24708_c1_g1 No hit Complete 86 9219.84 8.39 SP Extracellular
DN2166_c2_g1 No hit Complete 23 2274.83 8.34 No SP Extracellular
DN107250_c1_g1 No hit Complete 65 7394.73 7.56 SP Extracellular