. 2024 Aug 1;10(9):3202–3221. doi: 10.1021/acsinfecdis.4c00185

Table 2. Differentially Expressed Genes (DEGs, from Transcriptomics) and Proteins (DEPs, from Proteomics), which Share the Same Functional Pathway.

DEGs	DEPs	STRAIN	GOs
	ATP-binding cassette protein subfamily B, member 2, putative	Sb-RES	transport, uptake, efflux across cellular membranes (GO:0090662, GO:0090484, GO:0043191)
		MIL-RES
ATP-binding cassette protein subfamily C, member 1, putative		MIL-RES
ATP-binding cassette protein subfamily C, member 2, putative		MIL-RES
	acetyl-coenzyme A synthetase (AMP forming)	MIL-RES	energy metabolism and biosynthetic processes (GO:0016615, GO:0030060, GO:0004148, GO:0036440, GO:0004775, GO:0004739, GO:0004591, GO:0004473, GO:0004471)
fatty-acyl-CoA synthetase 2		Sb-RES
fatty-acyl-CoA synthetase 2		MIL-RES
	dimethylargininase	MIL-RES
argininosuccinate synthase		MIL-RES
argininosuccinate synthase		PAR-RES
	trypanothione reductase	PAR-RES	redox metabolism and cell detoxification (GO:0016624, GO:0016903, GO:0016668, GO:0016491, GO:0004602, GO:0004601, GO:0016616)
tryparedoxin peroxidase		PAR-RES
	dipeptidyl peptidase 3	PAR-RES
metallopeptidase, clan MF, family M17		Sb-RES