Table 2.
Templates selected to design 3D structure of lytic proteins.
| Group | Accession No | Domain |
Length (aa) |
Full length Template |
Template EAD |
Template CBD |
||||
|---|---|---|---|---|---|---|---|---|---|---|
| EAD | CBD | PDB ID | Similarity (%) | PDB ID | Similarity (%) | PDB ID | Similarity (%) | |||
| I | APD22232.1 | Amidase_2 | CW_binding_1 | 318 | 4X36 | 89.31 | ||||
| II | AZF89494.1 | CHAP | CW_binding_1 | 288 | 5UDM | 54.74 | 4IWT | 56.03 | ||
| III | CCJ09676.1 | CHAP | 237 | 6IST | 99.16 | |||||
| VI | CDS43823.1 | Glyco_hydro_25 | CW_7 | 342 | 2IXU | 85.05 | 5I8L | 100 | ||
aa: Amino acid, EAD: Enzymatically Active Domain, CBD: Cell Wall Binding Domain, PDB: Protein Data Bank.