Table 1.
Bin 23 GTDB:g_Halioglobus MiGa (AAI):Halioglobus 60.77% |
Bin 344 GTDB:f_JACDCH01 MiGa (AAI):Actinomarinicola 50.83% |
Bin 272 GTDB:f_Ilumatobacteraceae MiGa (AAI):Nocardioides 43.19% |
Bin 134 GTDB:g_SZUA35 MiGa (AAI):Micromonospora 43.60% |
Bin 301 GTDB:g_SZUA35 MiGa (AAI):Actinomarinicola 49.87% |
Bin 363 GTDB:g_CAISIP01 MiGa (AAI):Curvibacter 62.96% |
Bin 161 GTDB:o_Pseudomonadales MiGa (AAI):Spongiibacter 52.79% |
Bin 144 GTDB:g_Ga0077527 MiGa (AAI):Thauera 52.07% |
Bin 370 GTDB:g_Phenylobacterium MiGa (AAI):Phenylobacterium 59.95% |
Bin 377 GTDB:g_Comamonas MiGa (AAI):Acidovorax 83.65% |
|
---|---|---|---|---|---|---|---|---|---|---|
Aerobic alkane degradation | ||||||||||
AlkB | 2 | 0 | 0 | 0 | 0 | 0 | 2 | 4 | 0 | 0 |
AlmA_GroupI | 11 | 10 | 8 | 6 | 7 | 4 | 3 | 2 | 8 | 2 |
AlmA_GroupIII | 9 | 9 | 5 | 5 | 7 | 6 | 2 | 1 | 7 | 1 |
CYP153 | 21 | 20 | 8 | 11 | 15 | 5 | 2 | 0 | 11 | 2 |
LadA_alpha | 10 | 9 | 4 | 9 | 8 | 1 | 2 | 1 | 2 | 4 |
LadA_beta | 6 | 11 | 11 | 10 | 9 | 0 | 3 | 1 | 2 | 5 |
LadB | 20 | 23 | 22 | 23 | 26 | 0 | 4 | 1 | 4 | 4 |
pBmoB | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
pBmoC | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
PrmA | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
PrmC | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
sBmoX | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
sBmoY | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Aerobic aromatic degradation | ||||||||||
DmpO | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
DszC | 25 | 16 | 15 | 15 | 13 | 15 | 9 | 13 | 17 | 11 |
MAH_alpha | 9 | 3 | 7 | 3 | 2 | 5 | 5 | 1 | 1 | 4 |
MAH_beta | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 0 | 0 | 1 |
NdoB | 9 | 3 | 7 | 4 | 3 | 8 | 6 | 1 | 2 | 8 |
NdoC | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 0 | 0 | 1 |
non_NdoB_type | 11 | 5 | 9 | 6 | 4 | 13 | 9 | 1 | 3 | 9 |
TmoA_BmoA | 1 | 0 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | 0 |
TmoB_BmoB | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TmoE | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
TomA1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
TomA3 | 1 | 0 | 1 | 2 | 0 | 0 | 0 | 2 | 0 | 0 |
TomA4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Anaerobic alkane degradation | ||||||||||
AhyA | 10 | 6 | 8 | 6 | 8 | 7 | 7 | 7 | 2 | 5 |
AssA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Anaerobic aromatic degradation | ||||||||||
AbcA_1 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 5 | 1 | 0 |
AbcA_2 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 6 | 1 | 0 |
CmdA | 9 | 5 | 7 | 5 | 6 | 6 | 6 | 6 | 1 | 4 |
EbdA | 9 | 6 | 8 | 6 | 8 | 6 | 6 | 8 | 2 | 4 |
K27540 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 5 | 1 | 0 |
Among the analyzed MAGs, the top 10 MAGs with the most abundant key hydrocarbon degradation genes were identified and listed