Table 4.
The list of genes in the duplicated region of CS40
| No. | Locus tag | Product | No | Locus tag | Product |
|---|---|---|---|---|---|
| 1 | AYM39_08385 | Malyl-CoA lyase | 35 | AYM39_08555 | Aldehyde-activating protein |
| 2 | AYM39_08390 | Hypothetical protein | 36 | AYM39_08560 | Hypothetical protein |
| 3 | AYM39_08395 | Malate thiokinase subunit beta | 37 | AYM39_08565 | Hypothetical protein |
| 4 | AYM39_08400 | Malate thiokinase subunit alpha | 38 | AYM39_08570 | Methanofuran synthetase, MfnF |
| 5 | AYM39_08405 | Helicase SNF2 | 39 | AYM39_08575 | Aminodeoxychorismate synthase component I |
| 6 | AYM39_08410 | Transposase | 40 | AYM39_08580 | Uridylate kinase |
| 7 | AYM39_08415 | Hypothetical protein | 41 | AYM39_08585 | Hypothetical protein |
| 8 | AYM39_08420 | NrdJa | 42 | AYM39_08590 | Hypothetical protein |
| 9 | AYM39_08425 | Hypothetical protein | 43 | AYM39_08595 | GTP-binding protein |
| 10 | AYM39_08430 | Hypothetical protein | 44 | AYM39_08600 | GTP-binding protein |
| 11 | AYM39_08435 | NrdJb | 45 | AYM39_08605 | RND transporter |
| 12 | AYM39_08440 | Hypothetical protein | 46 | AYM39_08610 | Multidrug transporter |
| 13 | AYM39_08445 | Transposase | 47 | AYM39_08615 | Multidrug transporter |
| 14 | AYM39_08450 | Hypothetical protein | 48 | AYM39_08620 | Efflux transporter periplasmic adaptor subunit |
| 15 | AYM39_08455 | Hypothetical protein | 49 | AYM39_08625 | TetR family transcriptional regulator |
| 16 | AYM39_08460 | Hypothetical protein | 50 | AYM39_08630 | Hypothetical protein |
| 17 | AYM39_08465 | Hypothetical protein | 51 | AYM39_08635 | Multidrug transporter |
| 18 | AYM39_08470 | Hypothetical protein | 52 | AYM39_08640 | Transcription elongation factor GreB |
| 19 | AYM39_08475 | Integrase | 53 | AYM39_08645 | Peptidylprolyl isomerase |
| 20 | AYM39_08480 | Hypothetical protein | 54 | AYM39_08650 | Hypothetical protein |
| 21 | AYM39_08485 | Hypothetical protein | 55 | AYM39_08655 | Hypothetical protein |
| 22 | AYM39_08490 | Hypothetical protein | 56 | AYM39_08660 | Peptidase U6 |
| 23 | AYM39_08495 | Glutathionylspermidine synthase | 57 | AYM39_08665 | Sulfate transporter |
| 24 | AYM39_08500 | Hypothetical protein | 58 | AYM39_08670 | Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB |
| 25 | AYM39_08505 | Two component system response regulator | 59 | AYM39_08675 | Poly-beta-1,6-N-acetyl-D-glucosamine synthase |
| 26 | AYM39_08510 | Two component system sensor histidine kinase CreC | 60 | AYM39_08680 | Hypothetical protein |
| 27 | AYM39_08515 | Hypothetical protein | 61 | AYM39_08685 | Transcriptional regulator |
| 28 | AYM39_08520 | Nitrogen fixation protein (NifX) | 62 | AYM39_08690 | Peroxiredoxin |
| 29 | AYM39_08525 | Hypothetical protein | 63 | AYM39_08695 | Sodium pump decarboxylase subunit gamma |
| 30 | AYM39_08530 | tRNA-Ser | 64 | AYM39_08700 | Oxaloacetate decarboxylase |
| 31 | AYM39_08535 | Hypothetical protein | 65 | AYM39_08705 | Glutaconyl-CoA decarboxylase subunit beta |
| 32 | AYM39_08540 | Methenyltetrahydromethanopterin cyclohydrolase | 66 | AYM39_08710 | Hypothetical protein |
| 33 | AYM39_08545 | Alpha-L-glutamate ligase | 67 | AYM39_08715 | Hypothetical protein |
| 34 | AYM39_08550 | Triphosphoribosyl-dephospho-CoA synthase | 68 | AYM39_08720* | Transposase |
*This gene was partially duplicated within its sequence (The location of DH-1 WT chromosome from 1,909,795 to 1,909,843 bp; 49 bp)