Table 3.
Metadata and metrics reported by the MAGqual pipeline in CSV format
| Metric | Reported |
|---|---|
| Assembly quality | High-quality draft, near complete, medium-quality draft, low-quality draft, failed |
| Completeness score | Percentage (%) |
| Contamination score | Percentage (%) |
| Completeness software | CheckM (version) |
| 16S rRNA genes recovered | Yes/no |
| 16S rRNA software | Bakta (version & database version) |
| tRNA extracted | No./20 |
| tRNA software | Bakta (version & database version) |
| Completeness approach | Marker gene |
| Assembly statistics | - |
| Size | No. of bp |
| N50 | No. of bp |
| Maximum contig length | No. of bp |
| Number of contigs | No |