Table 4.

Time and memory requirements for the MAGqual pipeline when run with an increasing number of MAGs (10, 100, 500 and 1000) on an 8-core 32GB RAM instance. The real time, CPU time and maximum memory of the overall pipeline and also the individual steps of Bakta. CheckM and Python scripts are outlined below. As Bakta runs a separate job for each MAG, the average real time, average CPU time and average max memory are also included

		MAGqual overall		Bakta				CheckM		Scripts
		Wall-clock time (HH:MM:SS)	CPU time (HH:MM:SS)	Total wall-clock time (HH:MM:SS)	Total CPU time (HH:MM:SS)	Average wall-clock time (HH:MM:SS)	Average CPU time (HH:MM:SS)	Wall time (HH:MM:SS)	CPU time (HH:MM:SS)	Wall time (HH:MM:SS)	CPU time (HH:MM:SS)
No. of MAGs	10	00:40:21	01:46:38	00:26:05	01:27:44	00:02:37	00:08:46	00:03:55	00:15:00	00:00:10	00:00:12
	100	04:41:35	16:05:00	04:13:00	16:40:26	00:02:32	00:10:00	00:25:28	02:51:03	00:00:09	00:00:09
	500	22:59:02	84:18:59	20:58:15	77:18:18	00:02:31	00:09:17	03:31:57	11:06:23	00:00:12	00:00:10
	1000	45:48:35	164:08:03	41:56:34	95:31:20	00:02:31	00:11:44	04:27:48	29:30:18	00:00:15	00:00:11