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. 2024 Oct 11;23(11):4835–4848. doi: 10.1021/acs.jproteome.4c00102

Table 3. Functional Annotation Analysis by DAVID of the Proteins Whose Expression Was Significantly Upregulated by E2: with GOTERM_BP_DIRECT and GOTERM_MF_DIRECTa.

category term count UniProt ID p value fold enrichment
cluster 1 enrichment score: 4.78        
GOTERM_MF_DIRECT GO:0031267 ∼ small GTPase binding 13 Q14974, O00429, O14980, Q07960, Q8TEX9, Q9Y3P9, Q96P70, O95373, O60610, Q92973, Q13492, O14787, P55060 3.76 × 10–07 6.9
GOTERM_MF_DIRECT GO:0061608 ∼ nuclear import signal receptor activity 5 Q14974, Q92973, O14787, Q8TEX9, Q96P70 7.09 × 10–06 38.8
GOTERM_BP_DIRECT GO:0006606 ∼ protein import into nucleus 7 Q14974, Q92973, O14787, P55060, Q8TEX9, Q96P70, O95373 4.17 × 10–05 11.0
GOTERM_MF_DIRECT GO:0008139 ∼ nuclear localization sequence binding 4 Q14974, Q92973, O14787, Q8TEX9 6.65 × 10–04 23.0
cluster 2 enrichment score: 3.66        
GOTERM_BP_DIRECT GO:0006413 ∼ translational initiation 7 O15371, Q04637, Q99613, O75821, O00571, Q15056, P60842 9.59 × 10–07 20.9
GOTERM_MF_DIRECT GO:0003743 ∼ translation initiation factor activity 6 O15371, Q04637, Q99613, O75821, Q15056, P60842 5.52 × 10–05 14.6
GOTERM_BP_DIRECT GO:0001732 ∼ formation of cytoplasmic translation initiation complex 3 O15371, Q99613, O75821 0.0046 29.0
GOTERM_MF_DIRECT GO:0008135 ∼ translation factor activity, RNA binding 3 Q04637, Q15056, P60842 0.0094 20.2
cluster 3 enrichment score: 2.69        
GOTERM_BP_DIRECT GO:1900152 ∼ negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay 3 P67809, P11940, O60506 0.0013 54.8
GOTERM_BP_DIRECT GO:0070934 ∼ CRD-mediated mRNA stabilization 3 P67809, P11940, O60506 0.0019 44.9
GOTERM_BP_DIRECT GO:2000767 ∼ positive regulation of cytoplasmic translation 3 P67809, P11940, O60506 0.0036 32.9
cluster 4 enrichment score: 2.67        
GOTERM_BP_DIRECT GO:0061077 ∼ chaperone-mediated protein folding 6 P50990, O75190, P78371, P49368, P04792, Q02790 3.57 × 10–06 25.3
GOTERM_MF_DIRECT GO:0051082 ∼ unfolded protein binding 7 P50990, O00170, O75190, Q8N163, P78371, P49368, P04792 1.88 × 10–04 8.4
GOTERM_MF_DIRECT GO:0044183 ∼ protein binding involved in protein folding 5 P50990, O75190, P78371, P49368, P04792 3.14 × 10–04 15.2
GOTERM_BP_DIRECT GO:0032212 ∼ positive regulation of telomere maintenance via telomerase 4 P50990, P78371, P49368, P09651 0.0011 19.4
GOTERM_BP_DIRECT GO:1904851 ∼ positive regulation of establishment of protein localization to telomere 3 P50990, P78371, P49368 0.0016 49.4
GOTERM_BP_DIRECT GO:1904871 ∼ positive regulation of protein localization to Cajal body 3 P50990, P78371, P49368 0.0019 44.9
GOTERM_BP_DIRECT GO:1904874 ∼ positive regulation of telomerase RNA localization to Cajal body 3 P50990, P78371, P49368 0.0036 32.9
GOTERM_BP_DIRECT GO:0050821 ∼ protein stabilization 6 P50990, P78371, P46379, P49368, P83436, O60716 0.0122 4.3
GOTERM_MF_DIRECT GO:0016887 ∼ ATPase activity 8 P50990, P78371, P33993, O00571, P49368, P49736, O00148, P60842 0.0181 3.0
GOTERM_BP_DIRECT GO:0007339 ∼ binding of sperm to zona pellucida 3 P50990, P78371, P49368 0.0242 12.3
GOTERM_BP_DIRECT GO:0006457 ∼ protein folding 5 P50990, O75190, P78371, P49368, Q02790 0.0253 4.5
GOTERM_BP_DIRECT GO:1901998 ∼ toxin transport 3 P50990, P78371, P49368 0.0265 11.8
cluster 5 enrichment score: 1.75        
GOTERM_BP_DIRECT GO:0001836 ∼ release of cytochrome c from mitochondria 3 O00429, Q07812, P55957 0.0084 21.5
GOTERM_BP_DIRECT GO:0090200 ∼ positive regulation of release of cytochrome c from mitochondria 3 O00429, Q07812, P55957 0.0114 18.3
GOTERM_BP_DIRECT GO:2001244 ∼ positive regulation of intrinsic apoptotic signaling pathway 3 O00429, Q07812, P55957 0.0209 13.3
GOTERM_BP_DIRECT GO:0043065 ∼ positive regulation of apoptotic process 6 O00429, P50570, Q8N163, Q07812, O00571, P55957 0.0480 3.0
cluster 6 enrichment score: 1.58        
GOTERM_BP_DIRECT GO:0006334 ∼ nucleosome assembly 5 P49321, Q01105, P16403, P49736, P16402 0.0144 5.4
GOTERM_MF_DIRECT GO:0042393 ∼ histone binding 5 P49321, Q01105, Q96P70, P49736, O95373 0.0342 4.1
GOTERM_BP_DIRECT GO:0006260 ∼ DNA replication 4 P49321, Q01105, P33993, P49736 0.0368 5.4
cluster 7 enrichment score: 1.19        
GOTERM_BP_DIRECT GO:0071902 ∼ positive regulation of protein serine/threonine kinase activity 3 P36507, O00571, Q02750 0.0265 11.8
a

Only the categories and terms with p < 0.05 are listed.