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[Preprint]. 2024 Oct 25:rs.3.rs-5315913. [Version 1] doi: 10.21203/rs.3.rs-5315913/v1

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Figure 6. — Comparison of cluster performance of SV genes, HV genes, and their union set for Leiden for representative datasets. (a) comparison of clustering labels for cosMx NSCLC dataset for patient 2 FOV 7. (b) comparison of tissue space highlighting mis-classified clusters for each gene set in cosMx NSCLC dataset for patient 2 FOV 7, with cluster-specific spatial AMI scores for each gene set summarized in a table. (c) comparison of clustering labels for Xenium Kidney dataset sample N7. (d) comparison of tissue space highlighting mis-classified clusters for each gene set in Xenium Kidney dataset sample N7, with cluster-specific spatial AMI scores for each gene set summarized in a table. Annotation: TAL: thick ascending limb; ENDO: endothelial cells; PCT-TAL: proximal convoluted tube – thick ascending limb; MES: mesangial cell; PCT: proximal convoluted tube.