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. 2005 May;43(5):2345–2349. doi: 10.1128/JCM.43.5.2345-2349.2005

TABLE 3.

Amino acid variations in the HA1 region of influenza B virusesa,b

Group, lineage, and strain or isolate Amino acid at indicated position
Group 1 (n = 4),c B/Yamagata/16/ 88 lineage 29 40 48 56 75 88 116 126 131 162 168 172 179 180 183 184 197
Reference strain: B/Victoria/504/00 A H K T I K K N P R T P H I K E D
SA10 V Y R D T R N D - K N S Y V E G N
SA40 V - R D T R N D L K N - Y - E G N
SA43 V - R D T R N D L K N - Y - E G N
SA96 V - R D T R N D L K N - Y - E G N
B/Hong Kong/330/01 V - - K - R R - - K - S Y - E G S
Group 2 (n = 28), B/Victoria/2/87 lineage 34 197
Reference strain: B/Hong Kong/330/01 T S
SA115 M N
27 others - N
Group 3 (n = 73), B/Victoria/2/87 lineage 15 37 56 90 118 121 144 154 165 190 197 199
Reference strain: B/Hong Kong/1351/02 V T K V R T P A N V K T
SA11 M - - - - - - - - - N -
SA30, SA31, SA88, SA94 - I - - - - - - - - N -
SA9, SA19 - - E - - - - - - - N -
SA15 - - E I - - - - - - N A
SA21, SA28, SA90, SA91 - - - - - - L - - - N -
SA27 - - - - - - - S - - N -
SA92 - - - - K - - - - - N -
SA84 - - - - - A - - - - N -
SA53 - - - - - - - - K G N -
SA62, SA63 - - - - - - - - Y - N -
55 others - - - - - - - - - - N -
a

Amino acid residues of reference sequences are shown in boldface. Positions are listed for each group.

b

-, amino acid residues identical with the sequences of respective reference strain.

c

Italicized residues are identical to those of B/Hong Kong/330/01.