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. 2024 Jun 7;21(7):1349–1363. doi: 10.1038/s41592-024-02298-3

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© The Author(s) 2024

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

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Extended Data Fig. 6 — Evaluation results from seven protocols-platforms on four data scenarios: real data with multiple replicates, cell mixing experiment, SIRV-set 4 data, and simulation data. To display the evaluation results more effectively, we normalized all metrics to 0–1 range: 0 corresponds to the worst performance, and 1 corresponds to the best performance.