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. 2024 Nov 8;3(11):e70015. doi: 10.1002/jex2.70015

TABLE 1.

Sequences of the forward and reverse primers used for deflox PCR, RT‐qPCR and genotyping PCR.

Deflox PCR
Gene Forward (5′–3′) Reverse (5′–3′)
Smpd3 CACCCTCAGATCCTAACGCA GTCGCTCCCACTCTACAGAT
Alix CAGTTGATTAGATGTGTGAACTTAG GGATACTCACCATCATGGACAAACCACTCTATGCAAGCTTCAAAACTGACTGAG
RT‐qPCR
Gene Forward (5′–3′) Reverse (5′–3′)
Rpl CCTGCTGCTCTCAAGGTT TGGTTGTCACTGCCTCGTACTT
Hprt AGTGTTGGATACAGGCCAGAC CGTGATTCAAATCCCTGAAGT
Ubc AGGTCAAACAGGAAGACAGACGTA TCACACCCAAGAACAAGCACA
Gapdh TGAAGCAGGCATCTGAGGG CGAAGGTGGAAGAGTGGGAG
Smpd1 TGGGACTCCTTTGGATGGG CGGCGCTATGGCACTGAAT
Smpd2 TGGGACATCCCCTACCTGAG TAGGTGAGCGATAGCCTTTGC
Smpd3 ACACGACCCCCTTTCCTAATA GGCGCTTCTCATAGGTGGTG
Alix TAGTGTTTGCACGGAAGACAG GGGAGGACTGATAGGCTGGA
Tsg101 TCTAACCGTCCGTCAAACTGT TTGTACCAGTGAGGTTCACCA
Stam1 ACCCCTTCGACCAGGATGTT CCACAGTTTGATACACATGCTCC
Genotyping PCR
Forward (5′–3′) Reverse (5′–3′)
Smpd3+/− TATGAAGTGAAGCCAGGGG CCCACACAACCCCAAGAAACGTGGCCTATCACTGTTAC
Smpd3fl/fl CACCCTCAGATCCTAACGCA TGTGACTCTGGATGATCAGT