Table 1.
Summary of data sets used in this publication
| Study | Data repository | Disease |
|---|---|---|
| Bi et al., 2021 | 3CA/kidney | Renal cell carcinoma |
| Caron et al., 2020 | 3CA/hematologic | Acute lymphoblastic leukemia |
| Chen et al., 2021 | 3CA/prostate | Prostate cancer |
| Couturier et al., 2020 | 3CA/brain | Developing brain |
| Couturier et al., 2020 | 3CA/brain | Glioblastoma |
| Darmanis et al., 2017 | 3CA/brain | Glioblastoma |
| Eze et al., 2021 | UCSC Cell Browser | Developing brain |
| Hamed et al., 2022 | GEO: GSE200202 | Developing brain |
| Hovestadt et al., 2019 | 3CA/brain | Medulloblastoma |
| Hwang et al., 2022 | 3CA/pancreas | Pancreatic ductal adenocarcinoma |
| Ji et al., 2020 | 3CA/skin | Squamous cell carcinoma |
| Kildisiute et al., 2021 | Neuroblastoma Cell Atlas | Neuroblastoma |
| Kildisiute et al., 2021 | Neuroblastoma Cell Atlas | Normal fetal adrenal gland |
| Kürten et al., 2021 | 3CA/head and neck | Head and neck squamous cell carcinoma |
| Larsson, Dalmo et al., 2021 | ArrayExpress E-MTAB-9296 | Glioblastoma |
| Leblanc et al., 2022 | GEO: GSE173278, GSE193884 | Glioblastoma |
| Luo et al., 2021 | Short Read Archive: GSE156633 | Developing cerebellar granule |
| Luo et al., 2021 | Short Read Archive: GSE156633 | Medulloblastoma |
| Ma et al., 2019 | 3CA/liver and biliary | Hepatocellular carcinoma |
| Manno et al., 2021 | Sequence Read Archive: PRJNA637987 | Developing brain |
| Neftel et al., 2019 | 3CA/brain | Glioblastoma |
| Ocasio et al., 2019 | GEO: GSE129730 | Medulloblastoma |
| Ocasio et al., 2019 | GEO: GSE129730 | Cerebellum |
| Pelka et al., 2021 | 3CA/colorectal | Colorectal cancer |
| Qian et al., 2020 | 3CA/lung | Lung cancer |
| Qian et al., 2020 | 3CA/ovarian | Ovarian cancer |
| Rendeiro et al., 2020 | 3CA/hematologic | Chronic lymphocytic leukemia |
| Riether et al., 2020 | 3CA/hematologic | Acute myeloid leukemia |
| Wang et al., 2019 | 3CA/brain | Glioblastoma |
| Weng et al., 2019 | GEO: GSE122871 | Developing brain |
| Wu et al., 2020 | 3CA/hematologic | Acute myeloid leukemia |
| Wu et al., 2021 | 3CA/breast | Breast cancer |
| Zhou et al., 2021 | 3CA/sarcoma | Osteosarcoma |
| PBMC | 10X website | Human blood cells |