Table 4.
List of proteins by LC-MSE in cocoa extract with the corresponding peptides.
| Entry (Database) | Accession | protein.Description | protein score | MW | protein Matched Products | protein matched Peptides | Cov (%) | Peptide Intensity Sum | Sequence | MH + Error (ppm) | Score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| ASP_THECC (Uniprot) | P32765 | 21 kDa seed protein | 615 | 24438 | 30 | 7 | 30.77 | 203620 | (R)HSDDDGQIR(L) | 0.9339 | 6.6629 |
| (R)SDLDNGTPVIFSNADSKDDVVR(V) | 0.4055 | 5.9953 | |||||||||
| (K)DDVVR(V) | −2.412 | 5.6277 | |||||||||
| (R)VSTDVNIEFVPIR(D) | 2.7383 | 5.3816 | |||||||||
| (R)RSDLDNGTPVIFSNADSK(D) | −2.3835 | 5.2396 | |||||||||
| (R)LDNYDNSAGK(W) | −3.3845 | 5.1266 | |||||||||
| (R)ATGQSCPEIVVQR(R) | 1.7676 | 4.8949 | |||||||||
| A0A061EM85_THECC (Uniprot) | A0A061EM85 | Vicilin-A_ putative | 200 | 66198 | 37 | 9 | 17.67 | 75441 | (R)QDRR(E) | −1.8736 | 6.231 |
| (K)EQER(G) | −0.3204 | 5.622 | |||||||||
| (K)ELSFGVPSK(L) | 1.3752 | 5.6153 | |||||||||
| (R)SEEEEGQQR(N) | −1.5498 | 5.3042 | |||||||||
| (R)GTVVSVPAGSTVYVVSQDNQEK(L) | 3.0933 | 5.2171 | |||||||||
| (R)EQEEESEEETFGEFQQVK(A) | 1.6377 | 5.1098 | |||||||||
| (R)QQEEELQR(Q) | −3.0807 | 4.8992 | |||||||||
| (R)EKLEEILEEQR(G) | −1.8284 | 4.7921 | |||||||||
| (K)LTIAVLALPVNSPGK(Y) | −0.6553 | 4.6108 | |||||||||
| VCL_THECC (Uniprot) | Q43358 | Vicilin | 167 | 61483 | 32 | 8 | 17.33 | 55233 | (R)QDRR(E) | −1.8736 | 6.231 |
| (K)EQER(G) | −0.3204 | 5.622 | |||||||||
| (R)SEEEEGQQR(N) | −1.5498 | 5.3042 | |||||||||
| (R)GTVVSVPAGSTVYVVSQDNQEK(L) | 3.0933 | 5.2171 | |||||||||
| (R)EQEEESEEETFGEFQQVK(A) | 1.6377 | 5.1098 | |||||||||
| (R)QQEEELQR(Q) | −3.0807 | 4.8992 | |||||||||
| (R)EKLEEILEEQR(G) | −1.8284 | 4.7921 | |||||||||
| (K)LTIAVLALPVNSPGK(Y) | −0.6553 | 4.6108 | |||||||||
| A0A061GTA7_THECC (Uniprot) | A0A061GTA7 | Uncharacterized protein | 117 | 10317 | 4 | 1 | 7.53 | 5242 | (K)IEEHQSY(−) | −0.1395 | 5.2605 |
| A0A061GZ27_THECC (Uniprot) | A0A061GZ27 | Putative plant transposon protein domain-containing protein | 100 | 12772 | 6 | 1 | 13.76 | 6904 | (M)NQCHFSEVSCSICQK(V) | 0.6846 | 4.8622 |
| CAA44494.1 (NCBI) | CAA44494.1 | vicilin_ partial | 1582 | 54423 | 81 | 13 | 23.7 | 503177 | (R)EQEEESEEETFGEF(−) | 0.2798 | 7.8005 |
| (R)QDRR(E) | −1.8736 | 7.1311 | |||||||||
| (R)REQEEESEEETFGEF(−) | −0.781 | 6.6848 | |||||||||
| (R)NNPYYFPK(R) | 0.4712 | 6.3261 | |||||||||
| (R)DEEGNFK(I) | −1.2679 | 6.2127 | |||||||||
| (R)SEEEEGQQR(N) | −1.5498 | 6.203 | |||||||||
| (K)ESYNVQR(G) | 2.3721 | 6.1794 | |||||||||
| (R)GTVVSVPAGSTVYVVSQDNQEK(L) | 3.0933 | 6.1217 | |||||||||
| (K)EQER(G) | −1.8439 | 5.9501 | |||||||||
| (R)QQEEELQR(Q) | −3.0807 | 5.7974 | |||||||||
| (R)EKLEEILEEQR(G) | −1.8284 | 5.6899 | |||||||||
| (K)LTIAVLALPVNSPGK(Y) | −0.6553 | 5.5105 | |||||||||
| (K)LEEILEEQR(G) | 3.2998 | 5.3213 | |||||||||
| (R)EQEEESEEE(T) | 1.8693 | 0 | |||||||||
| (R)EQEEESEEET(F) | 1.9878 | 0 | |||||||||
| (R)EQEEESEEETFGE(F) | −1.9716 | 0 | |||||||||
| (R)EQEEESEEETFGEF(−) | 0.1171 | 0 | |||||||||
| (R)EQEEESEE(E) | −2.1412 | 0 | |||||||||