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Marker frequency analysis of the two chromosomes of V. cholerae ΔSI mapped against V. cholerae WT genome (A) and against V. cholerae ΔSI genome (B). The gap on chromosome 2 in panel (A) reflects the SIs deletion. The genome position is represented relative to the oriC (set to 0). Blue and green rhombus represent the average of 1 kbp windows, and red and garnet squares the average of 10 kbp windows in Chr1 and Chr 2, respectively.
