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. 2024 Nov 11;25:1069. doi: 10.1186/s12864-024-10976-x

Table 2.

Summary

Parse 10x
Inter-sample variability High Negligible
Intra-sample variability High Negligible
Sensitivity in gene detection Higher Lower
Minimum number of cells to load 100,000 800
Minimum number of recovered cells 200 500
Pause points 7 7
Benchwork  ~ 11 h  ~ 7.5 h
Maximum number of samples that can be analyzed in one kit with multiplexing 40 samples with 2500 cells/ sample (1 WT kit) 16 samples with 2500 cells/ sample (1 kit with 4 reactions)
Cell type annotation Difficult Easier
Doublet detection Based on genetic diversity or computational With hashtags