Figure 11.

Differences within the IgY public and private compartments under different H9N2 immunisation regimes based on clone CDR3 nucleotide structure. Private (individual-restricted) clones are shown in orange. Public clones (shared between more than two individuals) are shown in light blue. Dots represent individual bird observations of public and private clonal compartments. Error bars represent 95% bootstrap confidence intervals for the point estimates generated from 1,000 simulations of the model. Statistically significant differences between the model estimates are depicted above the plots based on their corresponding p-values: *p< 0.05; **p< 0.01; ***p< 0.001.