Interaction details of compound 1, compound 2, and aspirin with COX1 and COX2 proteins.
Proteins | Compounds | Binding energy (kcal mol−1) | Interacting residues | Nature of interactions |
---|---|---|---|---|
COX1 (6Y3C) | Compound 1 | −7.1 | His446 | H-bond |
His446 | C–H bond | |||
Val447 | Pi–sigma bond | |||
Val447 | Pi–sigma bond | |||
Leu408 | Pi–alkyl bond | |||
Leu295 | Pi–alkyl bond | |||
Gln203 | Pi-donor H-bond | |||
Compound 2 | −7.0 | Val447 | Alkyl bond | |
Val447 | Alkyl bond | |||
Ile444 | Alkyl bond | |||
Ile444 | Alkyl bond | |||
His388 | Pi–alkyl bond | |||
Aspirin | −6.2 | His388 | C–H bond | |
His386 | C–H bond | |||
Ala202 | Amide–Pi-stacked | |||
Met391 | Pi–sulfur | |||
Gln203 | van der Waals | |||
COX2 (1PXX) | Compound 1 | −8.4 | Gln369 | H-bond |
Ser126 | C–H bond | |||
Pro127 | C–H bond | |||
Arg61 | C–H bond | |||
Lys532 | Alkyl bond | |||
Phe371 | Pi–alkyl bond | |||
Arg61 | Pi–alkyl bond | |||
Arg61 | Pi–alkyl bond | |||
Compound 2 | −7.6 | Arg61 | Alkyl bond | |
Arg61 | Alkyl bond | |||
Aspirin | −6.1 | Ser530 | H-bond | |
Gly526 | Amide–Pi-stacked | |||
Val523 | Pi–alkyl | |||
Leu353 | Pi–alkyl | |||
Ala527 | Pi–alkyl |