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. 2024 Oct 23;40(11):btae630. doi: 10.1093/bioinformatics/btae630

Table 1.

The ratio of driver nodes to target nodes is presented for each algorithm, with the best result highlighted in bold.

Network features
Target details
Algorithm
Name —V— —E— <k> —T— Targets_selection BaGA GeneticAlg TCMM GTCA
Random 0.10 0.21 0.28 0.10
Real_network S.N prison 67 182 5.43 33 Local 0.04 0.20 0.34 0.13
Random 0.17 0.23 0.31 0.19
N.N C.Elegans 306 2345 15.33 153 Local 0.12 0.33 0.29 0.21
Random 0.81 0.78 0.82 0.82
Silwood 154 370 4.81 77 Local 0.8 0.79 0.82 0.81
Random 0.24 0.18 0.60 0.14
F.W Mangrove 97 1492 30.76 48 Local 0.15 0.22 0.72 0.21
Random 0.22 0.30 0.30 0.27
S208 122 189 3.10 61 Local 0.15 0.30 0.24 0.24
Random 0.19 0.39 0.29 0.30
E.C S420 252 399 3.17 126 Local 0.15 0.27 0.28 0.22
Random 0.67 0.68 0.81 0.72
Tr EColi 423 578 2.73 211 Local 0.62 0.65 0.71 0.80
BC_Gene Breast_956 956 6213 6.4 58 0.05 0.03 0.02 0.03 0.02
157 0.01 0.15 0.19 0.19 0.18
119 0.005 0.11 0.14 0.13 0.13
Breast_478 478 2055 4.2 50 0.001 0.04 0.03 0.04 0.03
DEF 1415 2435 3.44 112 0.68 0.53 0.68 0.63
Cancer_PPI HCC-1428 1495 2650 3.54 126 0.67 0.51 0.66 0.48
Breast MDA-MB-361 1478 2590 3.50 124 0.69 0.51 0.67 0.49
DEF 1047 1579 3.01 140 0.75 0.66 0.75 0.63
OVCA8 1157 1781 3.07 161 Essential proteins 0.73 0.63 0.72 0.60
Ovarian O19468 1047 1579 3.01 159 0.70 0.66 0.74 0.62
DEF 991 1484 2.99 168 0.74 0.67 0.69 0.62
KP-3 1134 1757 3.09 167 0.74 0.64 0.70 0.62
Pancreatic AsPC 1022 1534 3.0 125 0.75 0.63 0.67 0.60