TABLE 5.
Gene ontology classification of mRNAs displaying Pub1p binding without any changes in stability (class B)
| GO term | GO annotation | Genome frequency (3,129)
|
Gene frequency (33)a
|
P value | ||
|---|---|---|---|---|---|---|
| No. of annotations | % Total | No. of annotations | % Total | |||
| Biological process | ||||||
| GO:0008645 | Hexose transport | 7 | 0.2 | 2 | 6.1 | 2.16E−03 |
| GO:0015749 | Monosaccharide transport | 7 | 0.2 | 2 | 6.1 | 2.16E−03 |
| GO:0009059 | Macromolecule biosynthesis | 392 | 12.5 | 10 | 30.3 | 3.90E−03 |
| GO:0006644 | Phospholipid metabolism | 35 | 1.1 | 3 | 9.1 | 5.13E−03 |
| GO:0008643 | Carbohydrate transport | 12 | 0.4 | 2 | 6.1 | 6.44E−03 |
| Molecular function | ||||||
| GO:0017169 | CDP-alcohol phosphatidyltransferase activity | 2 | 0.1 | 2 | 6.1 | 1.08E−04 |
| GO:0005353 | Fructose transporter activity | 5 | 0.2 | 2 | 6.1 | 1.05E−03 |
| GO:0015578 | Mannose transporter activity | 5 | 0.2 | 2 | 6.1 | 1.05E−03 |
| GO:0016780 | Phosphotransferase activity, for other substituted phosphate groups | 5 | 0.2 | 2 | 6.1 | 1.05E−03 |
| GO:0005215 | Transporter activity | 221 | 7.1 | 8 | 24.2 | 1.30E−03 |
| GO:0005355 | Glucose transporter activity | 6 | 0.2 | 2 | 6.1 | 1.56E−03 |
| GO:0015145 | Monosaccharide transporter activity | 7 | 0.2 | 2 | 6.1 | 2.16E−03 |
| GO:0015149 | Hexose transporter activity | 7 | 0.2 | 2 | 6.1 | 2.16E−03 |
| GO:0019200 | Carbohydrate kinase activity | 9 | 0.3 | 2 | 6.1 | 3.62E−03 |
| GO:0015144 | Carbohydrate transporter activity | 11 | 0.4 | 2 | 6.1 | 5.43E−03 |
| Cellular component | ||||||
| GO:0005832 | Chaperonin-containing T complex | 6 | 0.2 | 2 | 6.1 | 1.56E−03 |
| GO:0005840 | Ribosome | 161 | 5.1 | 6 | 18.2 | 4.73E−03 |
GO annotation of 33 out of 35 class B targets were obtained and used for the analysis.