Table 2.
Antibiotic | Gene(s) | Primer pair | Drug conc. (μg/ml) | Cassette length (base pairs) |
---|---|---|---|---|
Ampicillin | Tn3 bla | 5′-CGCGGAACCCCTATTTGTTT-3′ 5′-GGTCTGACAGTTACCAATGC-3′ | 50 | 975 |
Tetracycline | Tn10 tetRA | 5′-CTCGACATCTTGGTTACCGT-3′ 5′-CGCGGAATAACATCATTTGG-3′ | 7 | 1,996 |
Kanamycin | Tn903 aph (type I) | 5′-CACGTTGTGTCTCAAAATCTC-3′ 5′-TACAACCAATTAACCAATTCTG-3′ | 20 | 944 |
Kanamycin | Tn5 aph (type II) | 5′-TATGGACAGCAAGCGAACCG-3′ 5′-TCAGAAGAACTCGTCAAGAAG-3′ | 20 | 949 |
Chloramphenicol | Tn9 cat | 5′-TGAGACGTTGATCGGCACGT-3′ 5′-ATTCAGGCGTAGCACCAGGC-3′ | 10 | 822 |
Spectinomycin | Tn21 aadA | 5′-AAACGGATGAAGGCACGAA-3′ 5′-TTATTTGCCGACTACCTTGG-3′ | 20 | 1,080 |
Gentamicin | Tn1696 aacC | 5′-CGAATCCATGTGGGAGTTTA-3′ 5′-TTAGGTGGCGGTACTTGGGT-3′ | 10 | 616 |