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. 2024 Oct 18;27(11):111196. doi: 10.1016/j.isci.2024.111196
REAGENT or RESOURCE SOURCE IDENTIFIER
Deposited data

Analyzed data This paper GEO: GSE124272
GEO: GSE150408
GEO: GSE172049
GEO: GSE47603
GEO: GSE67311

Oligonucleotides

Primer:
NADK2 forward, GCTCTACAGTCCGGAAGAACC;
NADK2 reverse, GCATCCCAACAACGAGAACG,
This paper N/A
Primer:
β-ACTIN forward, GATCATTGCTCCTCCTGAGC;
β-ACTIN reverse, ACTCCTGCTTGCTGATCCAC.
This paper N/A

Software and algorithms

Limma package (version 3.54.2) N/A
ggplot2 package (version 3.4.4) N/A
ComplexHeatmap package (version 2.15.4) N/A
VennDiagram package (version 1.7.3) N/A
R software (version 4.2.2) https://cloud.r-project.org/
SVA package (version 3.46.0) N/A
pROC package (version 1.18.0) N/A
rmda package (version 1.6) N/A
rms package (version 6.4.0) N/A
ResourceSelection packages (version 0.3–5) N/A
Cibersort/GSVA packages (version 1.44.5) https://cibersortx.stanford.edu/
ClusterProfiler package (version 4.6.2) N/A