Table 1.
Top 10 differentially expressed genes according to the location of the muscle biopsy independent of the type of myositis.
| Quadriceps vs. Biceps | Quadriceps vs. Deltoid | Deltoid vs. Biceps | ||||||
|---|---|---|---|---|---|---|---|---|
| gene | log2FC | padj | gene | log2FC | padj | gene | log2FC | padj |
| HOXC8 | 2.4 | 4.E-26 | HOXC8 | 2.3 | 1.E-32 | HOXA11-AS | −1.6 | 6.E-11 |
| POU3F3 | −2.5 | 4.E-21 | HOXC9 | 2.3 | 1.E-26 | HOXA11 | −1.6 | 2.E-10 |
| HOXC4 | 1.6 | 1.E-18 | HOXD9 | −2.0 | 1.E-26 | POU3F3 | −1.6 | 3.E-08 |
| HOXC9 | 2.1 | 9.E-18 | HOXD8 | −1.6 | 6.E-25 | TBX1 | −1.4 | 5.E-07 |
| HOXC-AS2 | 2.0 | 9.E-14 | HOXC4 | 1.4 | 2.E-24 | ALX4 | 1.4 | 2.E-06 |
| HOXC-AS1 | 1.8 | 3.E-10 | MAB21L1 | 1.6 | 2.E-22 | UCHL1 | 1.1 | 6.E-04 |
| HOXC6 | 1.3 | 9.E-10 | HOXC-AS2 | 2.4 | 1.E-20 | HOXA13 | −1.2 | 7.E-04 |
| IRX6 | −1.6 | 2.E-09 | HOXC6 | 1.4 | 2.E-18 | DACT2 | −1.2 | 2.E-03 |
| ZNF385A | −1.3 | 2.E-09 | IRX6 | −1.9 | 2.E-18 | CACNA1E | −1.1 | 7.E-03 |
log2FC: log2 fold-change