Table 1.
TE ID | Chr | Start | End | S1 reads | S2 reads | S1 strength S1/(S1 + S2) ∗ 100% | S1/S2 | 3′ gene | Distance TE/gene | 3′ gene reached by S2 reads |
---|---|---|---|---|---|---|---|---|---|---|
AT1G11265/ONSEN1 | Chr1 | 3780765 | 3785721 | 138 | 19 | 87.90% | 7.26 | AT1G11280 | 1613 | False |
AT1G21945/ONSEN7 | Chr1 | 7717255 | 7722647 | NA | NA | NA | NA | AT1G21950 | 612 | False |
AT1G48710/ONSEN5 | Chr1 | 18013162 | 18018435 | 321 | 18 | 94.70% | 17.83 | AT1G48730 | 1902 | True |
AT1G58140/ONSEN4 | Chr1 | 21524995 | 21529851 | 60 | 148 | 28.80% | 0.41 | AT1G58130 | 939 | True |
AT3G32415/ONSEN8 | Chr3 | 13369174 | 13374108 | NA | NA | NA | NA | AT3G32425 | 6636 | False |
AT3G59720/ONSEN6 | Chr3 | 22059535 | 22064329 | 102 | 41 | 71.30% | 2.49 | AT3G59740 | 2658 | False |
AT3G61330/ONSEN2 | Chr3 | 22695566 | 22700522 | 291 | 11 | 96.40% | 26.45 | AT3G61310 | 2732 | False |
AT5G13205/ONSEN3 | Chr5 | 4208083 | 4213084 | 230 | 39 | 85.50% | 5.9 | AT5G13210 | 1420 | False |
Ler1-ONSEN-13 | Chr2 | 586740 | 591695 | 397 | 18 | 95.70% | 22.06 | ATLER-2G11780 | 1572 | False |
Ler1-ONSEN-23 | Chr3 | 17904360 | 17909316 | 146 | 22 | 86.90% | 6.64 | ATLER-3G66970 | 142 | True |
Ler1-ONSEN-30 | Chr4 | 8394474 | 8399430 | 699 | 0 | 100% | inf | ATLER-4G38650 | 5355 | False |
Ler1-ONSEN-31 | Chr4 | 9796312 | 9801243 | NA | NA | NA | NA | ATLER-4G42665 | 3975 | False |
Ler1-ONSEN-32 | Chr5 | 751500 | 756456 | 179 | 8 | 95.70% | 22.38 | ATLER-5G12430 | 550 | True |
Ler1-ONSEN-33 | Chr5 | 2476353 | 2481309 | 173 | 1 | 99.40% | 173 | ATLER-5G17680 | 1923 | False |
Cvi0-ONSEN-27 | Chr3 | 3410998 | 3415955 | 640 | 141 | 81.90% | 4.54 | ATCVI-3G20890 | 2067 | True |
Cvi0-ONSEN-32 | Chr3 | 13231539 | 13236316 | 51 | 3 | 94.40% | 17 | ATCVI-3G50870 | 294 | True |
Cvi0-ONSEN-49 | Chr4 | 9597983 | 9602941 | 473 | 76 | 86.20% | 6.22 | ATCVI-4G40910 | 2029 | True |