Table 3.
Computational time/memory used while annotating the T2T genome.a
| Tool (period) | User time (h) | Wall time (h) | Peak memory usage (GB) |
|---|---|---|---|
| ULTRA10 (10) | 1.20 | 0.08 | 1.1 |
| ULTRA5 (10) | 0.89 | 0.06 | 1.0 |
| ULTRA0 (10) | 0.16 | 0.02 | 0.7 |
| tantan (10) | 0.02 | 0.02 | 1.3 |
| TRF (10) | 8.66 | 8.66 | 6.1 |
| ULTRA10 (500) | 114.83 | 7.17 | 3.7 |
| ULTRA5 (500) | 60.80 | 3.82 | 2.1 |
| ULTRA0 (500) | 6.50 | 0.40 | 2.0 |
| tantan (500) | 0.56 | 0.56 | 1.3 |
| TRF (500) | 10.20 | 10.20 | 19.6 |
a
Default settings were used for ULTRA10, TRF, and tantan. ULTRA5 uses 5 insertion/deletion states, and ULTRA0 uses no insertion/deletion states. TRF (10) crashed before annotating all chromosomes.