Figure 4.
Phylogeny of the 181 IncI1-reference plasmids harboured by Escherichia coli isolates from France, Germany, the Netherlands, Norway, Spain, the United Kingdom, 2013–2020 (n =410)
UK: United Kingdom.
Panel A. Phylogeny (Mash distance) of the reference plasmid set is presented.
Panel B. The length in kilobases of IncI1 reference plasmids is presented.
Panel C. Number of antimicrobial genes present in each reference plasmid.
Panel D. Distribution of Escherichia coli isolates with > 98% coverage and > 99% identity to the reference panel. The numbers on the left of the panel indicate the antimicrobial resistance profile index as per Supplementary Table S7.
