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. 2001 Mar;75(6):2584–2596. doi: 10.1128/JVI.75.6.2584-2596.2001

FIG. 7.

FIG. 7

Genomic footprint analyses of LMP1p. (A, B, C, D, and E) Upper strand. (F, G, and H) Lower strand. (A) Lane 1, G track from LCL 721 DNA; lane 2, footprint from LCL 721 cells; lane 3, footprint from Mutu III cells; lane 4, footprint from Mutu I cells; lane 5, G track from Rael DNA; lane 6, footprint from Rael cells; lane 7, G track from Raji DNA; lane 8, footprint from Raji cells. (B and C) Lane 1, G track from LCL 721 DNA; lanes 2 to 6, footprints. Lane 2, LCL 721 cells; lane 3, Mutu III cells; lane 4, Rael cells; lane 5, Raji cells; lane 6, Mutu I cells; lane 7, G track from Raji cells. (B) Protection of guanines against methylation by DMS indicated by lollipops. (D and E) Lane 1, G track from LCL 721 DNA, lanes 2 to 6, footprints; lane 2, LCL 721 cells; lane 3, Mutu III cells; lane 4, Rael cells; lane 5, Raji cells; lane 6, Mutu I cells; lane 7, G track from Mutu I cells; lane 8, G track from Rael cells. (F) Lane 1, G track from LCL 721 DNA; lanes 2 to 6, footprints. Lane 2, LCL 721 cells; lane 3, Mutu III cells; lane 4, Rael cells; lane 5, Raji cells; lane 6, Mutu I cells; lane 7, G track from Mutu I DNA; lane 8, G track from Raji DNA. (G and H) Lane 1, G track from LCL 721 DNA; lane 2, footprint from LCL 721 cells; lane 3, footprint from Mutu III cells; lane 4, G track from Mutu I DNA; lane 5, footprint from Mutu I cells; lane 6, G track from Rael DNA; lane 7, footprint from Rael cells; lane 8, G track from Raji DNA; lane 9, footprint from Raji cells. At the left of each panel, the locations of in vivo footprints, of previously described in vitro footprints, and of consensus elements are indicated by vertical bars, and at the right of each panel, nucleotide numbers are given according to the EBV sequence of Baer et al. (4).