Table 2. Genome assembly data for Asteroscopus sphinx, ilAstSphi1.1.
Genome assembly | ||
---|---|---|
Assembly name | ilAstSphi1.1 | |
Assembly accession | GCA_949699075.1 | |
Accession of alternate haplotype | GCA_949699085.1 | |
Span (Mb) | 857.30 | |
Number of contigs | 183 | |
Contig N50 length (Mb) | 9.6 | |
Number of scaffolds | 50 | |
Scaffold N50 length (Mb) | 29.1 | |
Longest scaffold (Mb) | 36.2 | |
Assembly metrics * | Benchmark | |
Consensus quality (QV) | 64.9 | ≥ 50 |
k-mer completeness | 100.0% | ≥ 95% |
BUSCO ** | C:98.8%[S:97.6%,D:1.1%],F:0.2%,M:1.0%,n:5,286 | C ≥ 95% |
Percentage of assembly mapped to
chromosomes |
99.8% | ≥ 95% |
Sex chromosomes | Z | localised homologous pairs |
Organelles | Mitochondrial genome: 15.35 kb | complete single alleles |
* Assembly metric benchmarks are adapted from column VGP-2020 of “Table 1: Proposed standards and metrics for defining genome assembly quality” from Rhie et al. (2021).
** BUSCO scores based on the lepidoptera_odb10 BUSCO set using version 5.3.2. C = complete [S = single copy, D = duplicated], F = fragmented, M = missing, n = number of orthologues in comparison. A full set of BUSCO scores is available at https://blobtoolkit.genomehubs.org/view/ilAstSphi1_1/dataset/ilAstSphi1_1/busco.