Table 2.
Major and minor hotspots in the QS15524F2:F3 and QS15544RIL populations.
| Population | Chromosome | Start of region (bp) | End of region (bp) | Size of region (bp) | Nb of interactions | Density (interactions/kbp) |
Percentile |
|---|---|---|---|---|---|---|---|
| QS15524F2:F3 | GM06 | 39,892,719 | 43,437,125 | 3,544,406 | 507 | 0.14 | Major (99th) |
| GM17 | 5,431,473 | 7,260,313 | 1,828,840 | 342 | 0.19 | ||
| QS15544RIL | GM01 | 39,404,966 | 39,405,971 | 1,005 | 17 | 16.92 | Major (99th) |
| GM02 | 46,648,011 | 46,714,310 | 66,299 | 80 | 1.21 | ||
| GM04 | 10,812,813 | 10,985,437 | 172,624 | 77 | 0.45 | ||
| GM05 | 3,769,727 | 3,884,649 | 114,922 | 38 | 0.33 | ||
| GM07 | 6,889,969 | 6,890,075 | 106 | 35 | 330.19 | ||
| GM09 | 34,116,171 | 34,117,683 | 1,512 | 18 | 11.91 | ||
| GM14 | 35,854,652 | 35,899,383 | 44,731 | 450 | 10.06 | ||
| GM15 | 6,116,797 | 6,146,533 | 29,736 | 20 | 0.67 | ||
| GM16 | 3,627,910 | 3,667,696 | 39,786 | 17 | 0.43 | ||
| QS15524F2:F3 | GM04 | 1,404,047 | 1,408,537 | 4,490 | 48 | 10.70 | Minor (95th) |
| GM05 | 208,889 | 294,855 | 85,966 | 46 | 0.54 | ||
| GM15 | 49,385,092 | 49,442,075 | 56,983 | 53 | 0.93 | ||
| GM151 | 49,442,075 | 49,442,237 | 162 | 240 | 1,480.00 | ||
| GM18 | 1,434,182 | 1,911,667 | 477,485 | 51 | 0.11 | ||
| GM182 | 1,911,667 | 1,935,386 | 23,719 | 40 | 1.69 | ||
| QS15544RIL | GM01 | 6,517,814 | 6,579,997 | 62,183 | 11 | 0.18 | Minor (95th) |
| GM01 | 6,580,209 | 6,580,306 | 97 | 10 | 103.09 | ||
| GM01 | 39,112,506 | 39,154,217 | 41,711 | 10 | 0.24 | ||
| GM01 | 39,399,889 | 39,404,966 | 5,077 | 10 | 1.97 | ||
| GM01 | 40,907,974 | 40,908,162 | 188 | 12 | 63.83 | ||
| GM02 | 8,822,628 | 8,834,850 | 12,222 | 9 | 0.74 | ||
| GM03 | 2,411,109 | 2,411,229 | 120 | 10 | 83.33 | ||
| GM03 | 2,411,229 | 2,450,947 | 39,718 | 16 | 0.40 | ||
| GM03 | 3,038,816 | 3,039,628 | 812 | 12 | 14.78 | ||
| GM03 | 6,809,980 | 6,810,064 | 84 | 9 | 107.14 | ||
| GM03 | 10,811,705 | 10,834,554 | 22,849 | 14 | 0.61 | ||
| GM03 | 10,834,651 | 10,836,440 | 1,789 | 15 | 8.39 | ||
| GM04 | 4,093,911 | 4,101,799 | 7,888 | 10 | 1.27 | ||
| GM04 | 4,158,205 | 4,185,355 | 27,150 | 16 | 0.59 | ||
| GM04 | 22,705,951 | 22,709,551 | 3,600 | 15 | 4.17 | ||
| GM04 | 23,570,549 | 23,642,207 | 71,658 | 14 | 0.20 | ||
| GM04 | 24,217,772 | 24,253,427 | 35,655 | 9 | 0.25 | ||
| GM05 | 3,081,540 | 3,124,214 | 42,674 | 11 | 0.26 | ||
| GM05 | 3,167,692 | 3,167,836 | 144 | 15 | 104.17 | ||
| GM05 | 3,583,876 | 3,584,733 | 857 | 12 | 14.00 | ||
| GM08 | 16,115,503 | 16,148,760 | 33,257 | 10 | 0.30 | ||
| GM09 | 33,937,720 | 33,971,428 | 33,708 | 9 | 0.27 | ||
| GM09 | 33,971,428 | 33,990,878 | 19,450 | 16 | 0.82 | ||
| GM09 | 34,060,804 | 34,116,171 | 55,367 | 9 | 0.16 | ||
| GM12 | 35,211,026 | 35,246,755 | 35,729 | 16 | 0.45 |
1 Interacts with GmMDE04 and GmPRR1a.
2 Interacts with GmLHCA4a.