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. 2024 Nov 6;14(11):1413. doi: 10.3390/biom14111413
Abbreviation Description, gene
1,3DPG 3-phospho-D-glyceroyl-phosphate
3DSD 3-dehydroshikimate dehydratase, aroZ, 3DSD, asbF
4CL 4-hydroxycinnamoyl-CoA ligase, 4CL
4HBS 4-hydroxybenzaldehyde synthetase
4PG 4-n-propylguaiacol
ACAR aldehyde carboxylic acid reductase, car
Ac-CoA acetyl-coenzyme A
Ace acetate
AcP acetyl phosphate
ADH alcohol dehydrogenase, AHD6
ADO aromatic dioxygenase, ado
AKR aldoketo reductases
ALDR aldehyde reductases, areA
APX1 ascorbate oxidase
ARO4 DAHP synthase, aro4
ARO7 chorismate mutase, aro7, csm
AroB DHQ synthase, aroB
AroD DHQ dehydratase, aroD
AroE Shikimate dehydrogenase, aroE
AroF, AroG, AroH DAHP synthase feedback regulated isoenzymes, aroF, aroG, aroH
BFD Benzoylformate decarboxylase, BFD
C3H 4-coumaric acid 3-hydroxylase, sam5, hpaBC
C4H cinnamate-4-hydroxylase, C4H
CADH coniferyl alcohol dehydrogenase, calA
CALDH coniferyl aldehyde dehydrogenase, calB
CCR cinnamoyl-CoA reductase, ccr
COMT caffeic acid O-methyltransferase, comt
CPL chorismate-pyruvate lyase, ubiC
CPR cytochrome P450 reductase, CPR
CSO carotenoid oxygenase, cso2
DAHP 3-deoxy-D-arabino-heptulosonate-7-phosphate
DCDDH 1,4-dicarboxylic acid dehydrogenase
DHGA 3,4-dihydroxyphenylglyoxylate
DHMA 3,4-dihydroxymandelate
DHQ 3-dehydroquinic acid
DHS 3-dehydroshikimic acid
DyP dye-decolorising peroxidase
E4P erythrose-4-phosphate
ECH enoyl-CoA hydratase, ech
EUGH eugenol hydroxylase, ehyA, ehyB
F6P fructose 6-phosphate
FCS feruloyl-CoA synthetase, fcs
FDC ferulic acid decarboxilase, fdc
G6P glucose 6-phosphate
GAP D-glyceraldehyde 3-phosphate
GapC GAP dehydrogenase
GDH1 NADP+ dependent glutamate dehydrogenases, gdh1
GDH2 NAD+ dependent glutamate dehydrogenases, gdh2
GltA citrate synthase, gltA
GPP1 glycerol-1-phosphate, gpp1
HBH Hydroxybenzoate hydroxylase, pobA, hbh
HCHL 4-hydroxycinnamate CoA-hydratase/lyase
HCT hydroxycinnamoyl transferase
HCys homocysteine
HMA hydroxymandelate
HmaS hydroxymandelate synthase, HmaS
HMO hydroxymandelate oxidase, HMO
HMPHP-CoA 4-hydroxy-3-methoxyphenyl-β-hydroxypropionyl-CoA
HpaBC Two-component flavin-dependent monooxygenase, hpaBC
HPP hydroxyphenylpyruvate
IcdA isocitrate dehydrogenase, icdA
IEM isoeugenol monooxygenase, iem
Lac laccase
LiP lignin peroxidase
LuxS S-ribosylhomocysteine lyase, luxS
MARE minimal aromatic aldehyde reduction ability
Met methionine
MetE, MetH methionine synthases, metE, metH
MetJ transcription regulator of methionine biosynthetic gene cluster, metJ
MetK SAM synthetase, metK
MnP manganese-dependent peroxidase
Mtn 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase, mtn
OMT O-methyltransferase, OMT, comt
PAD phenolic acid decarboxylase, pad
PAL phenylalanine ammonia-lyase, PAL
PCA protocatechuic acid
PcaHG protocatechuate dioxygenase, pcaHG
PDC1 pyruvate decarboxylase
PEP phosphoenolpyruvate
PET polyethylene terephthalate
PhdB HMPHP-CoA dehydrogenase, phdB
Pos5c cytosol-relocalised NADH kinase, pos5c
PPDO phenylpropanoid 2,3-dioxygenase
PpsA phosphoenolpyruvate synthase, ppsA
PPTase phophopantetheinyl transferase, entD, sfp, PPT
Pta phosphotransacetylase, pta
PtsH phosphocarrier protein, ptsH
Pyr pyruvate
RARE reduced aromatic aldehyde reduction ability
ROS reactive oxygen species
SAH S-adenosyl-L-homocysteine
SAM S-adenosyl-L-methionine
SerA phosphoglycerate dehydrogenase, serA
SRH S-ribosyl-L-homocysteine
TA terephthalic acid
TAL ammonia-lyase activity, sam8
TktA transketolase, tktA
TPADO TA 1,2-dioxygenase, tphA1, tphA2, tphB2
Trp tryptophan
UDP uridine-diphophate activated sugar
UGT UDP-glycosyltransferase
VAO vanillyl alcohol oxidase, vao, pchF
VDC vanillate decarboxylase, vdcBCD
VDH vanillin dehydrogenase, vdh
VDM vanillate demethylase, vanAB
VpVAN vanillin synthase, VpVan
VR vanillin reductase, vr
Xfpk phosphoketolase, xfpk
β-Gluc β-glucosidase