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. 2024 Oct 28;12(11):2472. doi: 10.3390/biomedicines12112472

Table 8.

Results of three methods of use (Mann–Whitney testing, LEfSe, and Random Forest).

RDP
Mann–Whitney U test LEfSe Random Forest n Abundance
control and native Eubacteriaceae Eubacteriaceae Eubacteriaceae 3 control
Enterobacteriaceae Enterobacteriaceae Enterobacteriaceae 3 native
Odoribacteraceae Odoribacteraceae 2 control
Christensenellaceae Christensenellaceae Christensenellaceae 3 control
Prevotellaceae Prevotellaceae 2 control
Muribaculaceae Muribaculaceae 2 control
control and newcomer Eubacteriaceae Eubacteriaceae Eubacteriaceae 3 control
Christensenellaceae Christensenellaceae Christensenellaceae 3 control
Selenomonadaceae Selenomonadaceae 2 newcomer
Desulfovibrionaceae Desulfovibrionaceae 2 newcomer
Enterobacteriaceae Enterobacteriaceae 2 newcomer
Ruminococcaceae Ruminococcaceae Ruminococcaceae 3 control
native and newcomer Ruminococcaceae Ruminococcaceae 2 native
Acidaminococcaceae Acidaminococcaceae 2 newcomer
control and arctic Eubacteriaceae Eubacteriaceae Eubacteriaceae 3 control
Enterobacteriaceae Enterobacteriaceae Enterobacteriaceae 3 arctic
Selenomonadaceae Selenomonadaceae 2 arctic
Prevotellaceae Prevotellaceae Prevotellaceae 3 control
Christensenellaceae Christensenellaceae Christensenellaceae 3 control
Muribaculaceae Muribaculaceae 2 Control
S ILVA
Mann–Whitney U test LEfSe Random Forest n Abundance
control and native Christensenellaceae Christensenellaceae Christensenellaceae 3 control
Enterobacteriaceae Enterobacteriaceae 2 native
Marinifilaceae Marinifilaceae 2 control
Prevotellaceae Prevotellaceae 2 control
Muribaculaceae Muribaculaceae 2 control
Barnesiellaceae Barnesiellaceae 2 control
control and newcomer Christensenellaceae Christensenellaceae Christensenellaceae 3 control
[Eubacterium]_coprostanoligenes_group [Eubacterium]_coprostanoligenes_group [Eubacterium]_coprostanoligenes_group 3 control
Selenomonadaceae Selenomonadaceae 2 newcomer
Desulfovibrionaceae Desulfovibrionaceae 2 newcomer
Enterobacteriaceae Enterobacteriaceae 2 newcomer
Muribaculaceae Muribaculaceae 2 control
native and newcomer [Eubacterium]_coprostanoligenes_group [Eubacterium]_coprostanoligenes_group [Eubacterium]_coprostanoligenes_group 3 native
Christensenellaceae Christensenellaceae 2 native
Acidaminococcaceae Acidaminococcaceae Acidaminococcaceae 3 newcomer
control and arctic Christensenellaceae Christensenellaceae Christensenellaceae 3 control
Enterobacteriaceae Enterobacteriaceae 2 arctic
Prevotellaceae Prevotellaceae 2 control
Muribaculaceae Muribaculaceae 2 control
Selenomonadaceae Selenomonadaceae 2 arctic
[Eubacterium]_coprostanoligenes_group [Eubacterium]_coprostanoligenes_group 2 control