Table 1.
Isothermal Amplification Assay | Pathogen (s) | Fuel | Reactants | Time to Chemical Heating | Amplification Time |
Amplified Product Detection | Analytical Sensitivity | The Used Device | Reference |
---|---|---|---|---|---|---|---|---|---|
1—LAMP | Zika virus | Magnesium Iron | Mg-Fe + H2O | 10 min | 60 min | Bioluminescence | 5 PFU/sample | [11] | |
2—LAMP | Zika virus | Magnesium Iron | Mg-Fe + H2O | 10 min | 40 min | Colorimetric detection—intercalating dye Leco Crystal Violet (LCV) |
5 PFU/sample | [12] | |
3—LAMP | Plasmodium falciparum malaria | Calcium oxide | CaO + H2O | 15 min | 45 min | Turbid visual detection and fluorescent (Calcein) detection | 50 copies/µL | [20] | |
4—LAMP | Plasmodium falciparum malaria | Calcium oxide | CaO + H2O | 15 min | 60 min | Turbid visual detection and fluorescent (Calcein) detection | 50 copies/µL | [21] | |
5—LAMP | HIV-1 | Magnesium Iron | Mg-Fe + H2O | 12 min | 60 min | Nucleic acid lateral flow detection | 75 copies/reaction | [23] | |
6—LAMP | HIV-1 | Magnesium Iron | Mg-Fe + H2O | 11 min | 60 min | BHQ1-labeled quencher probe | 3115 copies/mL | [24] | |
7—RPA | HIV-1 | Sodium acetate | Na+ + C2H3O2 | 1 min | 20–30 min | Nucleic acid lateral flow detection | 10 copies/µL | [25] | |
8—LAMP | Filarial parasites (B. malayi, O. volvulus, and W. bancrofti) | Magnesium Iron | Mg-Fe + H2O | 15 min | 40–70 min | Colorimetric detection—proton detection (pH-sensitive indicator dyes) |
B. malayi 1.0 pg DNA/reaction, O. volvulus 0.01 ng DNA/reaction, and W. bancrofti 0.1 pg DNA/reaction |
[26] | |
9—HDA | Clostridium difficile (C. difficile) | Iron filings | Fe + 3 O2 | 22 min | 30 min | Gel electrophoresis analysis | 1.25 × 10−2 pg/reaction | [29] | |
10—RPA/CRISPR | SARS-CoV-2 | Iron filings | Fe + 3 O2 | 2 min | 15 min | Nucleic acid lateral flow detection | 100 copies/reaction | [31] | |
11—RPA | T4 bacteriophage | Lithium | Li + H2O | 1 min | 15 min | - Fluorescent test (Taqman probe) - Gel electrophoresis |
NA | [32] | |
12—RPA | Enterohemorrhagic Escherichia coli O157:H7 | Calcium oxide | CaO + H2O | 9 min | 15 min | Nucleic acid lateral flow detection | 36.23 CFU/mL | [33] | |
13—LAMP | Cronobacter species | Calcium oxide | CaO + H2O | 7 min | 60 min | HNB (Hydroxy naphthol blue)—Metal indicator | 4.2 × 102 cfu/g | [43] | |
14—LAMP | Herpes simplex virus type 2 (HSV-2) | Magnesium Iron | Mg-Fe + H2O | 10 min | 60 min | Fluorescent intercalating dyes | 4.2 PFU/sample | [41] | |
15—LAMP | SARS-CoV-2 | Magnesium Iron | Mg-Fe + H2O | 3 min | 30 min | - pH-sensitive indicator dyes (Phenol red) - Fluorescent intercalating dyes |
10 copies/reaction | [37] | |
16—LAMP | HIV-1 | Calcium oxide | CaO + H2O | 10–15 min | 60 min | Fluorescence detection using labeled primer along with a quencher probe | HIV- 1 DNA: 10 copies/reaction HIV-1 RNA: 140 copies/reaction |
[44] |
NA = Not applicable.