Table 1.
Genes present in the chloroplast genome of S. pinguicula.
| Category | Gene Group | Gene Name |
|---|---|---|
| RNA genes | Ribosomal RNA genes (rRNA) | rrn4.5 (×2), rrn5 (×2), rrn16 (×2), rrn23 (×2) |
| Transfer RNA genes (tRNA) | trnA-UGC a (×2), trnC-GCA, trnD-GUC, trnE-UUC, trnF-GAA, trnG-GCC, trnG-UCC a, trnH-GUG (×2), trnI-CAU (×2), trnI-GAU a (×2), trnK-UUU a, trnL-CAA (×2), trnL-UAA a, trnL-UAG, trnM-CAU, trnN-GUU (×2), trnP-UGG, trnQ-UUG, trnR-ACG (×2), trnR-UCU, trnS-GCU, trnS-GGA, trnS-UGA, trnT-GGU, trnT-UGU, trnV-GAC (×2), trnV-UAC a, trnW-CCA, trnY-GUA, trnfM-CAU | |
| Photosynthesis | Photosystem I | psaA, psaB, psaC, psaI, psaJ |
| Photosystem II | psbA, psbB, psbC, psbD, psbE, psbF, psbH, psbI, psbJ, psbK, psbL, psbM, psbN, psbT, psbZ | |
| Subunit of cytochrome | petA, petB a, petD a, petG, petL, petN | |
| Subunit of synthase | atpA, atpB, atpE, atpF a, atpH, atpI | |
| Large subunit of rubisco | rbcL | |
| NADH dehydrogenase | ndhJ | |
| Self-replication | Small subunit of ribosome | rps2, rps3, rps4, rps7 (×2), rps8, rps11, rps12 b (×2), rps14, rps15 (×2), rps16 a, rps18, rps19 (×2) |
| Large subunit of ribosome | rpl2 a (×2), rpl14, rpl16 a, rpl20, rpl22, rpl23 (×2), rpl32, rpl33, rpl36 | |
| DNA-dependent RNA polymerase | rpoA, rpoB, rpoC1 a, rpoC2 | |
| Other genes | Maturase | matK |
| Chloroplast envelope membrane protein | cemA | |
| Translational initiation factor | infA | |
| Subunit acetyl-CoA carboxylase | accD | |
| C-type cytochrome synthesis | ccsA | |
| ATP-dependent protease subunit P | clpP b | |
| Unknown | Conserved open reading frames | ycf1 (×2), ycf2 (×2), ycf3 b, ycf4 |
Gene a: gene with one intron; Gene b: gene with two introns; Gene (×2): number of copies of multi-copy genes.