Table 1.
The enrichment analysis of predicted AD risk genes in top-ranked genes
| LIMO-GCN | DISHyper | GCN-GENE | GSI | ADBN-RR | GenePlexus | RWR-MH | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| topK |
|
P-value |
|
P-value |
|
P-value |
|
P-value |
|
P-value |
|
P-value |
|
P-value |
| 50 | 24 |
|
20 | 3.54
|
4 | 1.60
|
9 | 1.73
|
7 | 6.85
|
12 | 8.54
|
5 | 1.46
|
| 100 | 37 |
|
26 | 3.42
|
9 | 8.39
|
15 | 1.14
|
11 | 6.26
|
12 | 4.65
|
8 | 8.22
|
| 200 | 53 |
|
30 | 7.85
|
20 | 2.89
|
20 | 2.89
|
22 | 2.04
|
14 | 2.08
|
15 | 2.58
|
| 500 | 66 |
|
45 | 3.54
|
29 | 9.61
|
30 | 1.51
|
36 | 1.16
|
25 | 1.08
|
30 | 1.51
|
| 1000 | 84 |
|
60 | 1.84
|
38 | 7.88
|
36 | 1.19
|
52 | 2.86
|
33 | 5.67
|
46 | 5.47
|
Note: 
stands for the number of AD risk genes in top K ranked genes.