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. 2024 Nov 6;17(11):1491. doi: 10.3390/ph17111491

Table 4.

Binding affinity values of the studied compounds obtained from the docking simulations against the Ab1 kinase domain.

Ligand Experimental Binding Affinity (kcal mol−1) Ki (nM) Predicted Binding Affinity (kcal mol−1)
Imatinib −11.18 [a] 13.0 [38] −13.3
LMQC01 - - −8.6
LMQC04 - - −12.2

[a] Values calculated from experimentally determined inhibition constants (Ki), found in the PDBs, according to the equation ΔG = R.T.lnKi [39,40], were R (gas constant) = 1.987 × 10−3 kcal/(mol K) and T (temperature) = 310 K.