Table 1.
Information on the E11 sequences from West Africa analyzed in this study.
| Strain ID Number | Collection Year | Country | Case | Age (Month) | Sex | Isolated Month | Sequence Region | Sequence Length (nt) | Accession Number | Reference | Co-Infections |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 13_650_MAU_2013 | 2013 | Mauritania | AFP | 36 | M | September | Capsid protein | 3804 | PP816738 | This study | None |
| 13_473_SEN_2013 | 2013 | Senegal | AFP | N/A | N/A | N/A | VP3-VP1 protein | 688 | KY433623 | [23] | None |
| 13_700_MAU_2013 | 2013 | Mauritania | AFP | 16 | M | September | VP3-VP1 protein | 876 | KY433708 | [23] | None |
| 13_647_MAU_2013 | 2013 | Mauritania | AFP | 60 | M | August | Capsid protein | 3896 | PP8167377 | This study | None |
| 13_699_MAU_2013 | 2013 | Mauritania | AFP | 18 | M | September | Capsid protein | 3902 | PP816739 | This study | None |
| 13_754_SEN_2013 | 2013 | Senegal | AFP | 24 | M | October | Capsid protein | 4000 | PP816740 | This study | None |
| 13_653_SEN_2013 | 2013 | Senegal | AFP | 36 | M | September | VP3-VP1 protein | 690 | KY433626 | [23] | None |
| 14_530_NIG_2014 | 2014 | Niger | AFP | 24 | M | September | Capsid protein | 3900 | PP816741 | This study | None |
| 14_240_GUI_2014 | 2014 | Guinea | AFP | 24 | F | May | VP3-VP1 protein | 876 | KY433711 | [23] | None |
| 14_239_GUI_2014 | 2014 | Guinea | AFP | 36 | M | May | VP3-VP1 protein | 876 | KY433710 | [23] | None |
| 14_381_NIG_2014 | 2014 | Niger | AFP | 19 | M | June | VP3-VP1 protein | 876 | KY433712 | [23] | None |
| 14_128_NIG_2014 | 2014 | Niger | AFP | 17 | F | March | VP3-VP1 protein | 876 | KY433709 | [23] | None |
| 17_787_SEN_2017 | 2017 | Senegal | AFP | N/A | N/A | N/A | VP3-VP1 protein | 711 | OM827233 | [23] | None |
| 17_718_SEN_2017 | 2017 | Senegal | AFP | N/A | N/A | N/A | VP1 protein | 783 | PP816742 | This study | None |
| 21_279_SEN_2021 | 2022 | Senegal | AFP | 48 | M | March | Complete genome | 7357 | PP816743 | This study | None |
| 22_438_SEN_2022 | 2022 | Senegal | AFP | N/A | N/A | N/A | Capsid protein | 3900 | PP816746 | This study | None |
| 22_081_SEN_2022 | 2022 | Senegal | AFP | 24 | F | November | Capsid protein | 4003 | PP816744 | This study | None |
| 22_102_SEN_2022 | 2022 | Senegal | AFP | 24 | M | May | Capsid protein | 3800 | PP816745 | This study | None |
| 22_751_SEN_2022 | 2022 | Senegal | AFP | N/A | N/A | September | Capsid protein | 3800 | PP816747 | This study | None |
| 23_371_BFA_2023 | 2023 | Burkina Faso | ES | N/A | N/A | July | Capsid protein | 4000 | PP816749 | This study | E19 |
| 23_399_SEN_2023 | 2023 | Senegal | ES | N/A | N/A | July | Capsid protein | 4000 | PP816750 | This study | E19 |
| 23_368_SEN_2023 | 2023 | Senegal | ES | N/A | N/A | July | VP1 protein | 804 | PP816748 | This study | E19 |
| 23_415_BFA_2023 | 2023 | Burkina Faso | ES | N/A | N/A | July | Capsid protein | 3987 | PP816751 | This study | E12 |
F = female; M = male; N/A = not applicable; nt = nucleotide.