Table 1.
Genome characteristics of the NC22 strain.
Location | Size (bp) | GC content | No. of genes | GenBank accession No. | Acquired resistance genes | Virulence genes |
---|---|---|---|---|---|---|
Chromosome | 4886732 | 50.64% | 4426 | CP109953 | aph(3’’)-Ib, aph(6)-Id, bla CTX-M-55, floR, sul2, tet(A) | csgA, fdeC, fimH, fyuA, gad, hha, hlyE, irp2, iss, lpfA, neuC, nlpI, ompT, papA_F19, shiA, terC, tia, yehABCD |
Plasmid p1 | 7136 | 48.64% | 10 | CP109954 | − | − |
Plasmid p2 | 234214 | 46.66% | 234 | CP109955 | aac(3)-IIa, aadA16, aph(3’)-Ia, arr-3, bla CTX-M-64, dfrA27, mphA, oqxA, oqxB, qacE, sul1, tet(A) | terC |
Plasmid p3 | 255823 | 49.28% | 219 | CP109956 | − | anr, cvaC, etsC, hlyF, iroN, iss, iucC, iutA, mchF, ompT, sitA, traJ, tsh |