Table 2.

Phenotype counts of all non-locally-restricted samples from GP2’s 7th data release with visually-confirmed deletions in genes of interest. Proportions of the total population are included in parentheses per diagnosis. “VaPD” stands for Vascular Parkinsonism.

Visually-Confirmed Deletions
Diagnosis	Total Population	PRKN	LINGO2	APP
PD	23,089	236 (1.0%)	162 (0.7%)	7 (0.03%)
Control	13,366	91 (0.7%)	119 (0.9%)	5 (0.03%)
Population Control	5,458	25 (0.5%)	35 (0.6%)	0
PSP	760	7 (0.9%)	2 (0.3%)	0
Other	382	2 (0.5%)	2 (0.5%)	0
DLB	296	1 (0.3%)	2 (0.7%)	0
Mix	252	1 (0.4%)	6 (2.4%)	0
MSA	243	4 (1.6%)	0	0
Prodromal	120	0	1 (0.8%)	0
AD	114	1 (0.9%)	0	0
LBD	75	0	0	0
Undetermined-MCI	71	1 (1.4%)	0	0
Undetermined-Dementia	27	0	0	0
CBD/CBS	23	0	0	0
FTD	3	0	0	0
VaPD	1	0	0	0
Total	44,280	369	329	12