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. 2005 Jun 27;33(Web Server issue):W154–W159. doi: 10.1093/nar/gki588

Table 1.

Prediction results with the 2880 protein dataset using the ANN

Approach Coverage (%) Probability (%) Accuracy (%) MCC
Qo(H) Qo(Nh) Qp(H) Qp(Nh)
AA 58.4 78.5 68.1 63.7 65.5 0.31
MSA 66.7 67.3 66.7 53.4 67.0 0.34
AA + ACC_O 60.9 72.0 68.5 65.0 66.4 0.33
AA + SS_O 67.9 74.4 72.8 70.1 71.2 0.43
Seq–Str network (SS_O) 58.5 80.7 75.1 66.2 69.6 0.40
Seq–Str network (SS_P) 56.5 77.5 71.5 64.2 67.1 0.37

AA: amino acid sequence; MSA: multiple sequence alignment; ACC_O: observed accessibility (DSSP); SS_O: secondary structure observed (DSSP); seq: sequence; str: structure; SS_P: secondary structure predicted (PSIPRED).

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