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. 2024 Nov 27;63(11):e70013. doi: 10.1002/gcc.70013

TABLE 2.

Table showing the probes used in FISH analysis for the breakpoint characterization.

Region Probes References/sources
Chr. 1 Centromere (α‐satellite) D1Z5 (Vysis CEP1) graphic file with name GCC-63-e70013-g009.jpg https://www.molecular.abbott/us/en/chromosome‐main/1
1q12 (satellite‐II and ‐III) pUC1.77 [13]
Satellite‐II Sat.2 Oligo [14]
Chr. 14 NOR sequences RP5‐1174A5 graphic file with name GCC-63-e70013-g007.jpg http://www.biologia.uniba.it/rmc/5‐alfoidi/dJ1174A5.html
β‐satellite RP1‐98C19 [15]
Centromere (α‐satellite) D14Z1 (p14.1) http://www.biologia.uniba.it/rmc/5‐alfoidi/alf‐14‐22.html
Chr. 15 NOR sequences RP5‐1174A5 graphic file with name GCC-63-e70013-g011.jpg http://www.biologia.uniba.it/rmc/5‐alfoidi/dJ1174A5.html
β‐satellite RP1‐98C19 [15]
Satellite‐III D15Z1 (Vysis CEP15) https://www.molecular.abbott/us/en/chromosome‐main/15
Centromere (α‐satellite) D15Z3, D15Z4 (pMC15, Vysis CEP15) http://www.biologia.uniba.it/rmc/5‐alfoidi/alf‐15.html, https://www.molecular.abbott/us/en/chromosome‐main/15
Chr. 16 16pter RP1‐121I4 graphic file with name GCC-63-e70013-g001.jpg [16]
Centromere (α‐satellite) D16Z2 (LPE 016 satellite enumeration probe) https://www.ogt.com/products/product‐search/cytocell‐satellite‐enumeration‐probes/
Satellite‐II D16Z3 (pHuR195) [17]
16q11 RP11‐373L4 https://genome.ucsc.edu/ (hg19: 46,523,986‐46,696,894)
RP11‐627O2 https://genome.ucsc.edu/ (hg19: 46,843,904‐47,021,633)
16q12 RP11‐719K16 https://genome.ucsc.edu/ (hg19: 47,042,582‐47,210,175)
Chr. 21 NOR sequences RP5‐1174A5 graphic file with name GCC-63-e70013-g005.jpg http://www.biologia.uniba.it/rmc/5‐alfoidi/dJ1174A5.html
Centromere (α‐satellite) D21Z1 (pZ21A) http://www.biologia.uniba.it/rmc/5‐alfoidi/alf‐13‐21.html
Whole chromosome paint XCP21 https://metasystems‐probes.com/en/probes/xcp/d‐0321‐100‐or/
Chr. 22 NOR sequences RP5‐1174A5 graphic file with name GCC-63-e70013-g008.jpg http://www.biologia.uniba.it/rmc/5‐alfoidi/dJ1174A5.html
Centromere (α‐satellite) D22Z1 (p14.1) http://www.biologia.uniba.it/rmc/5‐alfoidi/alf‐14‐22.html
Chr. Y Satellite‐III DYZ1 graphic file with name GCC-63-e70013-g004.jpg https://www.molecular.abbott/us/en/chromosome‐main/y

Note: In green are listed the centromeric probes; in red, the specific ones for satellite‐II and ‐III sequences; in black, the probes that identified NORs; in blue the probes for euchromatic regions.

Abbreviations: Chr, chromosome; NORs, nucleolar organizer regions.