Skip to main content
. 2024 Nov 11;9(47):47261–47273. doi: 10.1021/acsomega.4c08365

Table 5. Binding Scores, Amino Acid Interactions, and Bond Lengths of the Selected Compounds within the Active Site of E. coli DNA Gyrase B.

    Interacting residues
      Hydrophobic interaction
Compound Binding score (S value) kcal/mol H-bonding π-cation, π-anion, π-alkyl interactions van der Waals interactions
9n –11.42 Asn46 Arg76, Pro79, Ile94, Ile78, Ala47, Val71, Asp73 Gly77, Glu50, Gln72, Met166, Val43, Thr165, Val120, Val167
9o –11.28 Asn46 Arg76, Pro79, Ile94, Ile78, Ala47, Val71, Asp73 Arg136, Gly77, Glu50, Gln72, Met166, Val43, Thr165, Val120, Val167,
Ligand inhibitor –11.76 GLY77, Asn46, ASP73 Glu50, Arg136, Ala47, Pro79, Ile94, Ile78 Met166, Gln72, Val71, Val167, Val43, Thr165, Arg76