Table 2.
Rodents positive by qPCR for Borrelia spp
| Rodent code | Municipality | Department | Longitude | Latitude | Positive species by qPCR | 16S rRNA nPCR primer pairs | bp | Percentage of identity with Borrelia sp. R57 (GenBank accession number AY626138) | GenBank accession number |
|---|---|---|---|---|---|---|---|---|---|
| R-53 | Los Cordobas | Córdoba | 76°20 ′1.74"W | 8°49 ′53.1"N | Zygodontomys sp. | FD3_F/16S1_R | 673 | 96.64% | O557427 |
| 16S2_F/T50_R | 344 | 96.09% | O557428 | ||||||
| VN-15 | Urumita | La Guajira | 75° 20′ 664"W | 12° 16′ 979"N | Zygodontomys sp. | FD3_F/16S1_R | 603 | 96.02% | OR564036 |
| 16S2_F/T50_R | 408 | 98.16% | O557430 | ||||||
| VN 024 | Villa Nueva | La Guajira | 73° 02′ 261"W | 10° 35′ 563"N | Sigmodon alstoni | – | – | – | – |
| VN 025 | Villa Nueva | La Guajira | 73° 02′ 261"W | 10° 35′ 563"N | Sigmodon alstoni | – | – | – | – |