TABLE 4.
Gene | Nuc IDa | Fold changeb |
---|---|---|
Angelman syndrome gene, E6-AP ubiquitin protein ligase 3A (UBE3A) | AF002224 | ∼29.5, ∼8.1 |
Beta nerve growth factor | X52599 | −5.4, ∼−8.4 |
CIG49 | AF026939 | 17.9, 38.9 |
Cryptochrome 1 (photolyase-like) | D83702 | −3.3, −5.7 |
Cyclin-dependent kinase inhibitor 1B (p27, Kip1) | AI304854 | −7.6, ∼−5.8 |
Folate receptor 3 | U08471 | −3.8, ∼−3.9 |
GRO3 oncogene | M36821 | −6.2, ∼−7.9 |
Homo sapiens 14A6CK DNA sequence | X72882 | −33.7, ∼3.2 |
Histone deacetylase 7B | AB018287 | −5.5, −12.3 |
Human mRNA for proto-oncogene protein | D14497 | −4.3, ∼−8.4 |
Hypothetical protein FLB6421 | AI133727 | 26.5, ∼31.9 |
Inhibitor of apoptosis protein 1 | U45878 | −3.1, −3.7 |
Interferon, beta | V00535 | ∼65.1, ∼8.1 |
Interferon-induced 17-kDa/15-kDa protein | M13755 | 8.6, 13.4 |
Interferon-induced 56-kDa protein | M24594 | 3.9, 4.7 |
ISG-54K gene (interferon-stimulated gene) exon 2 | M14660 | 29.6, ∼47.1 |
KIAA0354 gene product | AB002352 | −6, −6.4 |
KIAA0477 protein | AB007946 | −6.8, ∼−4.3 |
Melanoma growth stimulatory activity (MGSA) | X54489 | −3, −4.3 |
Mitogen-activated protein kinase kinase kinase 8 | Z14138 | −5.1, ∼−4.6 |
Novel human gene mapping to chomosome 13, similar to rat RhoGAP | AL049801 | −3.7, −3.1 |
Protein kinase C-alpha | AF035594 | ∼−10.3, ∼−4.3 |
rel proto-oncogene | X75042 | −4.4, ∼−4.4 |
Transforming growth factor beta-2 | M19154 | ∼−8.3, ∼−3.5 |
Tyrosine kinase arg gene mRNA | M35296 | −5.4, ∼−4.1 |
Nuc ID, nucleotide sequence identification or sequence accession number.
Two fold change values were determined in independent experiments. A ∼ symbol in front of a fold change value indicates that the transcript was scored as absent in either the baseline or experimental sample and that the fold change was then calculated using the background noise value as the intensity for that comparison. The complete data set with difference calls can be accessed at http://www.molbio.princeton.edu/labs/shenk/browneetal2001/.